Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NIPAL3Q6P499 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NIPAL3Q6P499 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NIPAL3Q6P499 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.05■□□□□ 0.48
NIPAL3Q6P499 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NIPAL3Q6P499 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NIPAL3Q6P499 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.05■□□□□ 0.48
NIPAL3Q6P499 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NIPAL3Q6P499 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NIPAL3Q6P499 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NIPAL3Q6P499 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
NIPAL3Q6P499 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NIPAL3Q6P499 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NIPAL3Q6P499 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NIPAL3Q6P499 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 LSM12P1-201ENST00000411836 588 ntBASIC18.04■□□□□ 0.48
NIPAL3Q6P499 BX276092.2-201ENST00000417668 665 ntBASIC18.04■□□□□ 0.48
NIPAL3Q6P499 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 AL589743.5-201ENST00000616611 1050 ntBASIC18.04■□□□□ 0.48
NIPAL3Q6P499 AC105020.6-201ENST00000621523 1217 ntBASIC18.04■□□□□ 0.48
NIPAL3Q6P499 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NIPAL3Q6P499 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NIPAL3Q6P499 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.03■□□□□ 0.48
NIPAL3Q6P499 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NIPAL3Q6P499 KRT17P1-201ENST00000399211 1546 ntBASIC18.03■□□□□ 0.48
NIPAL3Q6P499 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NIPAL3Q6P499 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
NIPAL3Q6P499 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NIPAL3Q6P499 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NIPAL3Q6P499 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NIPAL3Q6P499 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NIPAL3Q6P499 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NIPAL3Q6P499 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.03■□□□□ 0.48
NIPAL3Q6P499 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.03■□□□□ 0.48
NIPAL3Q6P499 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NIPAL3Q6P499 TSPY6P-201ENST00000448518 926 ntBASIC18.03■□□□□ 0.48
NIPAL3Q6P499 AL109923.1-201ENST00000618799 583 ntBASIC18.03■□□□□ 0.48
NIPAL3Q6P499 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NIPAL3Q6P499 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NIPAL3Q6P499 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NIPAL3Q6P499 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NIPAL3Q6P499 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NIPAL3Q6P499 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NIPAL3Q6P499 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NIPAL3Q6P499 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NIPAL3Q6P499 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NIPAL3Q6P499 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NIPAL3Q6P499 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NIPAL3Q6P499 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.02■□□□□ 0.48
NIPAL3Q6P499 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NIPAL3Q6P499 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NIPAL3Q6P499 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NIPAL3Q6P499 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.02■□□□□ 0.48
NIPAL3Q6P499 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
NIPAL3Q6P499 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.02■□□□□ 0.48
NIPAL3Q6P499 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
NIPAL3Q6P499 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.02■□□□□ 0.48
NIPAL3Q6P499 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.02■□□□□ 0.48
NIPAL3Q6P499 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.02■□□□□ 0.47
NIPAL3Q6P499 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
NIPAL3Q6P499 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
NIPAL3Q6P499 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.02■□□□□ 0.47
NIPAL3Q6P499 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NIPAL3Q6P499 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
NIPAL3Q6P499 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NIPAL3Q6P499 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NIPAL3Q6P499 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 AIRN-201ENST00000601203 4374 ntBASIC18.01■□□□□ 0.47
NIPAL3Q6P499 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms