Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN20P56880 PNMA6B-201ENST00000538162 1200 ntBASIC18.17■□□□□ 0.5
CLDN20P56880 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN20P56880 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN20P56880 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN20P56880 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN20P56880 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN20P56880 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN20P56880 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN20P56880 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN20P56880 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN20P56880 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN20P56880 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN20P56880 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN20P56880 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
CLDN20P56880 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN20P56880 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN20P56880 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN20P56880 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN20P56880 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN20P56880 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN20P56880 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN20P56880 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CLDN20P56880 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.16■□□□□ 0.5
CLDN20P56880 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN20P56880 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
CLDN20P56880 UNC93B5-201ENST00000530315 699 ntBASIC18.16■□□□□ 0.5
CLDN20P56880 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.16■□□□□ 0.5
CLDN20P56880 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN20P56880 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN20P56880 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN20P56880 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN20P56880 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN20P56880 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN20P56880 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CLDN20P56880 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN20P56880 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN20P56880 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN20P56880 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN20P56880 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN20P56880 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN20P56880 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN20P56880 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CLDN20P56880 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN20P56880 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN20P56880 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.15■□□□□ 0.5
CLDN20P56880 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
CLDN20P56880 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CLDN20P56880 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN20P56880 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN20P56880 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
CLDN20P56880 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN20P56880 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN20P56880 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN20P56880 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN20P56880 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN20P56880 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLDN20P56880 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLDN20P56880 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
CLDN20P56880 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
CLDN20P56880 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLDN20P56880 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CLDN20P56880 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN20P56880 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN20P56880 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN20P56880 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CLDN20P56880 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN20P56880 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN20P56880 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN20P56880 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN20P56880 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN20P56880 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.14■□□□□ 0.49
CLDN20P56880 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN20P56880 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN20P56880 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN20P56880 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN20P56880 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN20P56880 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CLDN20P56880 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN20P56880 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN20P56880 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN20P56880 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN20P56880 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN20P56880 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLDN20P56880 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN20P56880 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN20P56880 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN20P56880 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN20P56880 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN20P56880 ESRRAP1-201ENST00000400596 1257 ntBASIC18.13■□□□□ 0.49
CLDN20P56880 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN20P56880 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN20P56880 POU5F1P3-201ENST00000428824 1078 ntBASIC18.13■□□□□ 0.49
CLDN20P56880 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.13■□□□□ 0.49
CLDN20P56880 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN20P56880 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN20P56880 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN20P56880 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN20P56880 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN20P56880 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms