Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNCGO76070 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNCGO76070 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNCGO76070 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.39□□□□□ -0.27
SNCGO76070 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNCGO76070 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SNCGO76070 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNCGO76070 OR7E47P-201ENST00000546390 1422 ntBASIC13.39□□□□□ -0.27
SNCGO76070 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SNCGO76070 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
SNCGO76070 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNCGO76070 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SNCGO76070 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC13.38□□□□□ -0.27
SNCGO76070 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
SNCGO76070 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNCGO76070 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNCGO76070 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNCGO76070 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNCGO76070 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNCGO76070 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNCGO76070 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNCGO76070 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNCGO76070 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
SNCGO76070 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNCGO76070 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC13.38□□□□□ -0.27
SNCGO76070 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.38□□□□□ -0.27
SNCGO76070 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
SNCGO76070 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SNCGO76070 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC13.38□□□□□ -0.27
SNCGO76070 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC13.38□□□□□ -0.27
SNCGO76070 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC13.38□□□□□ -0.27
SNCGO76070 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC13.38□□□□□ -0.27
SNCGO76070 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNCGO76070 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNCGO76070 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
SNCGO76070 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
SNCGO76070 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SNCGO76070 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SNCGO76070 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNCGO76070 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNCGO76070 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNCGO76070 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SNCGO76070 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNCGO76070 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNCGO76070 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNCGO76070 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
SNCGO76070 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SNCGO76070 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCGO76070 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC13.37□□□□□ -0.27
SNCGO76070 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCGO76070 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCGO76070 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCGO76070 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCGO76070 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCGO76070 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SNCGO76070 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC13.37□□□□□ -0.27
SNCGO76070 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCGO76070 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SNCGO76070 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCGO76070 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCGO76070 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SNCGO76070 AC104581.1-202ENST00000635932 2618 ntBASIC13.37□□□□□ -0.27
SNCGO76070 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCGO76070 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.37□□□□□ -0.27
SNCGO76070 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC13.37□□□□□ -0.27
SNCGO76070 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC13.37□□□□□ -0.27
SNCGO76070 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SNCGO76070 AC093503.3-201ENST00000624917 2352 ntBASIC13.37□□□□□ -0.27
SNCGO76070 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.37□□□□□ -0.27
SNCGO76070 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SNCGO76070 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCGO76070 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCGO76070 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCGO76070 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCGO76070 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SNCGO76070 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNCGO76070 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC13.36□□□□□ -0.27
SNCGO76070 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.36□□□□□ -0.27
SNCGO76070 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SNCGO76070 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
SNCGO76070 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC13.36□□□□□ -0.27
SNCGO76070 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC13.36□□□□□ -0.27
SNCGO76070 AC018470.1-201ENST00000624790 3129 ntBASIC13.36□□□□□ -0.27
SNCGO76070 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.36□□□□□ -0.27
SNCGO76070 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNCGO76070 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SNCGO76070 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms