Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMEM88BA6NKF7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMEM88BA6NKF7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMEM88BA6NKF7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC23.26■■□□□ 1.31
TMEM88BA6NKF7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TMEM88BA6NKF7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TMEM88BA6NKF7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TMEM88BA6NKF7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
TMEM88BA6NKF7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TMEM88BA6NKF7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TMEM88BA6NKF7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
TMEM88BA6NKF7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TMEM88BA6NKF7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC23.25■■□□□ 1.31
TMEM88BA6NKF7 UNC93B7-201ENST00000509439 705 ntBASIC23.25■■□□□ 1.31
TMEM88BA6NKF7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC23.25■■□□□ 1.31
TMEM88BA6NKF7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
TMEM88BA6NKF7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC23.25■■□□□ 1.31
TMEM88BA6NKF7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TMEM88BA6NKF7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC23.25■■□□□ 1.31
TMEM88BA6NKF7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.25■■□□□ 1.31
TMEM88BA6NKF7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TMEM88BA6NKF7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TMEM88BA6NKF7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TMEM88BA6NKF7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.24■■□□□ 1.31
TMEM88BA6NKF7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC23.24■■□□□ 1.31
TMEM88BA6NKF7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TMEM88BA6NKF7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TMEM88BA6NKF7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC23.24■■□□□ 1.31
TMEM88BA6NKF7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC23.24■■□□□ 1.31
TMEM88BA6NKF7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
TMEM88BA6NKF7 AC092329.2-201ENST00000598402 547 ntBASIC23.24■■□□□ 1.31
TMEM88BA6NKF7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TMEM88BA6NKF7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TMEM88BA6NKF7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TMEM88BA6NKF7 KRT8P20-201ENST00000423953 1409 ntBASIC23.24■■□□□ 1.31
TMEM88BA6NKF7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
TMEM88BA6NKF7 AC011484.1-201ENST00000377652 1995 ntBASIC23.23■■□□□ 1.31
TMEM88BA6NKF7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TMEM88BA6NKF7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC23.23■■□□□ 1.31
TMEM88BA6NKF7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TMEM88BA6NKF7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TMEM88BA6NKF7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TMEM88BA6NKF7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TMEM88BA6NKF7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC23.23■■□□□ 1.31
TMEM88BA6NKF7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC23.23■■□□□ 1.31
TMEM88BA6NKF7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC23.23■■□□□ 1.31
TMEM88BA6NKF7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC23.23■■□□□ 1.31
TMEM88BA6NKF7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC23.23■■□□□ 1.31
TMEM88BA6NKF7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC23.23■■□□□ 1.31
TMEM88BA6NKF7 GXYLT1P4-201ENST00000613576 1192 ntBASIC23.23■■□□□ 1.31
TMEM88BA6NKF7 HYMAI.1-201ENST00000620949 238 ntBASIC23.23■■□□□ 1.31
TMEM88BA6NKF7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC23.23■■□□□ 1.31
TMEM88BA6NKF7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
TMEM88BA6NKF7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TMEM88BA6NKF7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.23■■□□□ 1.31
TMEM88BA6NKF7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
TMEM88BA6NKF7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 TUBB8P6-201ENST00000436895 1288 ntBASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 AC009078.2-202ENST00000463353 338 ntBASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 PTBP1P-201ENST00000554374 1601 ntBASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
TMEM88BA6NKF7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
TMEM88BA6NKF7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM88BA6NKF7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.21■■□□□ 1.31
TMEM88BA6NKF7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM88BA6NKF7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM88BA6NKF7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
TMEM88BA6NKF7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC23.21■■□□□ 1.31
TMEM88BA6NKF7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC23.21■■□□□ 1.31
TMEM88BA6NKF7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC23.21■■□□□ 1.31
TMEM88BA6NKF7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC23.21■■□□□ 1.31
TMEM88BA6NKF7 MIR2861-201ENST00000636310 90 ntBASIC23.21■■□□□ 1.31
TMEM88BA6NKF7 LINC01311-201ENST00000565162 1445 ntBASIC23.21■■□□□ 1.31
TMEM88BA6NKF7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.21■■□□□ 1.31
TMEM88BA6NKF7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.21■■□□□ 1.31
TMEM88BA6NKF7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM88BA6NKF7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.21■■□□□ 1.31
TMEM88BA6NKF7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM88BA6NKF7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM88BA6NKF7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM88BA6NKF7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM88BA6NKF7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.2■■□□□ 1.3
TMEM88BA6NKF7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms