Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 AC087623.3-201ENST00000607047 1098 ntBASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 AC016405.3-201ENST00000607710 860 ntBASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 KRT8P17-201ENST00000453110 1448 ntBASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 KRT18P68-201ENST00000392293 1000 ntBASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 KRT18P5-201ENST00000436075 1291 ntBASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 MFSD11-216ENST00000590393 1141 ntBASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV30A0A087WSZ9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 AL691432.2-201ENST00000607222 2038 ntBASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 HLA-G-202ENST00000376815 851 ntBASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 HLA-G-203ENST00000376818 1127 ntBASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 AC231657.2-201ENST00000624556 255 ntBASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 KRT8P20-201ENST00000423953 1409 ntBASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 AC068338.2-201ENST00000563278 1430 ntBASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV30A0A087WSZ9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms