Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 TEAD1-207ENST00000638666 1281 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AL596275.2-207ENST00000641188 675 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AL596275.2-204ENST00000641628 552 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AL596275.2-206ENST00000641957 626 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC112198.2-201ENST00000426589 6996 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC007848.1-201ENST00000538430 1405 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 SCN1A-220ENST00000641603 12506 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 Z95327.2-201ENST00000414579 1873 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC007938.2-201ENST00000604666 2634 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 PSG9-203ENST00000291752 1055 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 MMP26-201ENST00000300762 989 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 OR9K2-201ENST00000305377 1122 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC017079.1-201ENST00000333650 415 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AMELX-201ENST00000348912 737 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 RN7SKP36-201ENST00000363997 312 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 MIR193A-201ENST00000384882 88 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 RPS14P4-201ENST00000415880 418 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC092810.3-201ENST00000416349 473 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 MRPS21P5-201ENST00000417885 231 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC009226.1-203ENST00000418850 741 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 CD24P1-201ENST00000422383 225 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01865-201ENST00000430529 845 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AL389925.1-201ENST00000432257 728 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 Z83841.1-201ENST00000433173 968 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AL359265.1-201ENST00000440296 795 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 GTF3AP5-201ENST00000442645 697 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AL451074.4-201ENST00000447545 470 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC093157.1-205ENST00000449473 1298 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC002553.2-201ENST00000453217 340 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 Z82173.1-201ENST00000453924 484 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 RN7SL403P-201ENST00000481783 305 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 SCG5-207ENST00000497208 949 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01021-205ENST00000514255 545 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 KLF3P1-201ENST00000521506 1022 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AP006245.2-201ENST00000522004 300 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC024940.3-201ENST00000538551 316 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AP002892.2-201ENST00000544195 560 ntTSL 4 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AL079304.1-201ENST00000554595 828 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC100826.1-201ENST00000558010 890 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 C6orf229-201ENST00000565469 814 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC090826.1-203ENST00000569235 490 ntBASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC01558Q9Y6Z2 RN7SL237P-201ENST00000580912 287 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms