Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC073342.2-201ENST00000595842 1800 ntBASIC6.78□□□□□ -1.32
PCDH9Q9HC56 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 SYT14P1-202ENST00000600441 1448 ntBASIC6.78□□□□□ -1.32
PCDH9Q9HC56 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 AC105749.1-201ENST00000631338 2008 ntBASIC6.78□□□□□ -1.32
PCDH9Q9HC56 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 AP003170.5-201ENST00000397185 335 ntBASIC6.78□□□□□ -1.32
PCDH9Q9HC56 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 AL355355.1-201ENST00000442900 793 ntBASIC6.78□□□□□ -1.32
PCDH9Q9HC56 RN7SKP198-201ENST00000459286 306 ntBASIC6.78□□□□□ -1.32
PCDH9Q9HC56 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 NPM1P27-201ENST00000502784 830 ntBASIC6.78□□□□□ -1.32
PCDH9Q9HC56 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 OR52H2P-201ENST00000514607 902 ntBASIC6.78□□□□□ -1.32
PCDH9Q9HC56 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 AC004836.1-201ENST00000623032 634 ntBASIC6.78□□□□□ -1.32
PCDH9Q9HC56 AC061999.1-201ENST00000624454 177 ntBASIC6.78□□□□□ -1.32
PCDH9Q9HC56 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 AC027559.1-201ENST00000636288 271 ntBASIC6.78□□□□□ -1.32
PCDH9Q9HC56 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
PCDH9Q9HC56 AC110373.1-201ENST00000505994 3505 ntBASIC6.77□□□□□ -1.32
PCDH9Q9HC56 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 AC011504.1-201ENST00000623331 4103 ntBASIC6.77□□□□□ -1.33
PCDH9Q9HC56 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 AP000641.1-201ENST00000531988 1639 ntBASIC6.77□□□□□ -1.33
PCDH9Q9HC56 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 AC004023.1-201ENST00000561473 1744 ntBASIC6.77□□□□□ -1.33
PCDH9Q9HC56 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 PTPN2P1-201ENST00000423212 1072 ntBASIC6.77□□□□□ -1.33
PCDH9Q9HC56 YY1P1-201ENST00000427625 668 ntBASIC6.77□□□□□ -1.33
PCDH9Q9HC56 E2F6P1-201ENST00000428850 745 ntBASIC6.77□□□□□ -1.33
PCDH9Q9HC56 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 E2F6P3-201ENST00000441743 743 ntBASIC6.77□□□□□ -1.33
PCDH9Q9HC56 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 AL121578.2-201ENST00000448797 447 ntBASIC6.77□□□□□ -1.33
PCDH9Q9HC56 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 CCNJP2-201ENST00000457810 1163 ntBASIC6.77□□□□□ -1.33
PCDH9Q9HC56 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 RN7SL267P-201ENST00000485107 261 ntBASIC6.77□□□□□ -1.33
PCDH9Q9HC56 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 AC091917.2-201ENST00000505002 744 ntBASIC6.77□□□□□ -1.33
PCDH9Q9HC56 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.77□□□□□ -1.33
PCDH9Q9HC56 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 AP005639.1-201ENST00000526939 192 ntBASIC6.77□□□□□ -1.33
PCDH9Q9HC56 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 AC068408.1-201ENST00000577406 1144 ntBASIC6.77□□□□□ -1.33
PCDH9Q9HC56 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 AL049840.5-201ENST00000602827 552 ntBASIC6.77□□□□□ -1.33
PCDH9Q9HC56 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms