Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AL512326.1-201ENST00000443050 721 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC044797.1-201ENST00000445744 679 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AL929410.2-201ENST00000451170 189 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 SUMO2P10-201ENST00000452006 288 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC013787.1-201ENST00000460165 307 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 SRRM1P2-201ENST00000464531 1192 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 TAAR3P-201ENST00000466706 1078 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 NDUFA5P5-201ENST00000468361 342 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 TAAR3P-202ENST00000481759 1025 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC105420.1-201ENST00000504389 582 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC007346.2-201ENST00000564816 892 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AL451085.1-201ENST00000604546 690 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AL096803.3-201ENST00000609032 532 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC092106.3-201ENST00000611308 722 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC087241.4-201ENST00000612441 480 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC092794.1-201ENST00000612734 582 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 RN7SL680P-201ENST00000620379 299 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC079298.2-201ENST00000623885 459 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AL160394.1-201ENST00000624765 724 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 FGL2-202ENST00000637771 989 ntBASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SSBP3Q9BWW4 PRNCR1-201ENST00000635449 12727 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 SNX18P13-201ENST00000412442 529 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 MTND4LP21-201ENST00000415303 295 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms