Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 AL590128.1-201ENST00000433407 286 ntBASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 MED28P7-201ENST00000456611 530 ntBASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 SNORA35.1-201ENST00000458908 128 ntBASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 RN7SL654P-201ENST00000479178 292 ntBASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 AC091965.3-201ENST00000506236 208 ntBASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 FRG2IP-201ENST00000563581 781 ntBASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 AC233702.7-202ENST00000582941 211 ntBASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 AP001264.1-201ENST00000620602 703 ntBASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 AC018692.2-201ENST00000624130 348 ntBASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 MIR128-2-201ENST00000384893 84 ntBASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 RPS10P21-201ENST00000430654 475 ntBASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 RPL5P10-201ENST00000445207 894 ntBASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 NDUFB4P1-201ENST00000462398 381 ntBASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 AC090602.1-201ENST00000469695 252 ntBASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 RPL7AP23-201ENST00000482625 776 ntBASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 KATNBL1P4-201ENST00000503545 918 ntBASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 RN7SKP64-201ENST00000517206 328 ntBASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 FAM30C-201ENST00000561158 410 ntBASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 AC005495.1-201ENST00000586611 1211 ntBASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 NDUFA3P1-201ENST00000588007 252 ntBASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 AC116165.3-201ENST00000614524 400 ntBASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 AL445649.1-201ENST00000615941 691 ntBASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 AL157762.1-201ENST00000619612 415 ntBASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 AC106782.7-201ENST00000624024 418 ntBASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 AC133555.5-201ENST00000624430 418 ntBASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 AC073857.1-201ENST00000625082 1054 ntBASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 AL132640.3-201ENST00000630473 177 ntBASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 AC099654.11-201ENST00000638857 294 ntBASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC28BQ9BUN5 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 RNU12-2P-201ENST00000364789 156 ntBASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 VDAC2P3-201ENST00000430995 828 ntBASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 Z83838.1-202ENST00000456225 839 ntBASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 AL928654.1-201ENST00000476081 354 ntBASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC28BQ9BUN5 RNA5SP318-201ENST00000516352 92 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms