Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LINC00491-201ENST00000505527 722 ntTSL 3 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 RNU6-1308P-201ENST00000516817 103 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 CCND2P1-201ENST00000539268 799 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 LINC01579-201ENST00000553818 561 ntTSL 4 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 AC004828.1-201ENST00000555303 654 ntTSL 3 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 NR2F2-AS1-207ENST00000560170 547 ntTSL 4 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 AC099684.3-201ENST00000574483 560 ntTSL 4 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 AC009977.1-201ENST00000586015 570 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 AC091132.5-201ENST00000590995 560 ntTSL 5 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 AC100843.3-201ENST00000591796 259 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 AC006116.10-201ENST00000591836 581 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 DYNLL1P1-201ENST00000595442 269 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 AC069499.2-201ENST00000610665 382 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 MIR6127-201ENST00000614019 109 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 CNTNAP3P1-201ENST00000616657 906 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 AC092650.2-201ENST00000619984 902 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 EAF1-AS1-212ENST00000626521 561 ntTSL 5 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 LINC00595-215ENST00000635422 651 ntTSL 5 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 MIR1302-1-201ENST00000637932 143 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 NCAM1-228ENST00000621128 4698 ntTSL 5 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 SULT1C2-201ENST00000251481 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 ZNF280A-201ENST00000302097 2148 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 PTPN20-201ENST00000374218 2872 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 MTND5P1-201ENST00000445440 1375 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 ANO2-202ENST00000356134 3717 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 CCDC162P-202ENST00000368966 6751 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 MTND5P3-201ENST00000438536 1800 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 SCNN1G-201ENST00000300061 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 LARP1B-202ENST00000394288 2151 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
USB1Q9BQ65 NPR3-202ENST00000326958 6380 ntTSL 2 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 ULBP1-201ENST00000229708 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
USB1Q9BQ65 LIMCH1-209ENST00000509277 3474 ntTSL 2 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 ERICH6-203ENST00000491361 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
USB1Q9BQ65 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
USB1Q9BQ65 LYZ-201ENST00000261267 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
USB1Q9BQ65 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
USB1Q9BQ65 TRIM53AP-201ENST00000532014 1544 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 AC002464.1-201ENST00000569685 1530 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 PARL-212ENST00000639100 1513 ntTSL 5 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 BPIFA1-201ENST00000354297 1079 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
USB1Q9BQ65 Y_RNA.166-201ENST00000363730 102 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 TSACC-202ENST00000368252 491 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
USB1Q9BQ65 RNU4-31P-201ENST00000384211 141 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 RNU6-1160P-201ENST00000384546 104 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 MIR25-201ENST00000384816 84 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 RAB28P1-201ENST00000411517 641 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 AL353604.1-201ENST00000413901 596 ntTSL 3 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 RPA2P2-201ENST00000419698 796 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 SDCBPP2-201ENST00000424643 885 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 AP000266.1-201ENST00000450936 582 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
USB1Q9BQ65 HNRNPA3P2-201ENST00000451198 662 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 RN7SL318P-201ENST00000471955 297 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 ACTR3P3-201ENST00000480448 893 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 RPL35P6-201ENST00000490024 372 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 RPARP-AS1-203ENST00000494270 711 ntTSL 2 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 AC008868.1-201ENST00000509786 737 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 SRD5A3-AS1-202ENST00000510637 926 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
USB1Q9BQ65 RPL7L1P13-201ENST00000511702 739 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 RNY4P37-201ENST00000516225 96 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 AF279873.3-201ENST00000523063 766 ntTSL 3 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 AP003122.4-201ENST00000530980 758 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 AC243972.3-201ENST00000539655 198 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 AC069235.1-202ENST00000545535 540 ntTSL 3 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 CD63-206ENST00000548160 648 ntTSL 2 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 AL022318.2-201ENST00000558766 258 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 OR4F28P-201ENST00000559128 938 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 AC012414.3-201ENST00000559621 748 ntTSL 5 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 CDRT7-201ENST00000568256 767 ntTSL 3 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 PDE6G-202ENST00000571004 458 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms