Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AL133387.3-201ENST00000450669 522 ntTSL 5 BASIC8.62□□□□□ -1.03
HLA-CQ95604 TCEAL4P1-201ENST00000453620 588 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 RFC5P1-201ENST00000454419 874 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC8.62□□□□□ -1.03
HLA-CQ95604 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
HLA-CQ95604 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC8.62□□□□□ -1.03
HLA-CQ95604 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC8.62□□□□□ -1.03
HLA-CQ95604 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC8.62□□□□□ -1.03
HLA-CQ95604 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC8.62□□□□□ -1.03
HLA-CQ95604 AC091839.1-201ENST00000513087 269 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC8.62□□□□□ -1.03
HLA-CQ95604 AC022832.1-201ENST00000530718 645 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC8.62□□□□□ -1.03
HLA-CQ95604 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC8.62□□□□□ -1.03
HLA-CQ95604 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC8.62□□□□□ -1.03
HLA-CQ95604 MIR4666A-201ENST00000580160 79 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 AC022432.1-201ENST00000595739 310 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 AL078623.1-201ENST00000602702 907 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 CGA-202ENST00000610310 615 ntTSL 3 BASIC8.62□□□□□ -1.03
HLA-CQ95604 Y_RNA.812-201ENST00000610788 101 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 OFCC1-217ENST00000611763 875 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
HLA-CQ95604 Y_RNA.784-201ENST00000613803 101 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 Y_RNA.787-201ENST00000616522 101 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 Y_RNA.780-201ENST00000617336 101 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 Y_RNA.801-201ENST00000619005 101 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.62□□□□□ -1.03
HLA-CQ95604 AC018816.2-201ENST00000621460 353 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 ASB8-218ENST00000629941 278 ntTSL 5 BASIC8.62□□□□□ -1.03
HLA-CQ95604 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 AL590644.1-202ENST00000634972 590 ntTSL 3 BASIC8.62□□□□□ -1.03
HLA-CQ95604 AC241377.2-202ENST00000636462 997 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
HLA-CQ95604 ADAMTS9-AS1-206ENST00000493124 1511 ntTSL 5 BASIC8.62□□□□□ -1.03
HLA-CQ95604 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC8.62□□□□□ -1.03
HLA-CQ95604 LARS-202ENST00000394434 4766 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 MIR4290HG-201ENST00000426593 2720 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 HSPD1P5-201ENST00000511127 1720 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
HLA-CQ95604 HHAT-207ENST00000541565 3164 ntTSL 2 BASIC8.62□□□□□ -1.03
HLA-CQ95604 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 RIPOR2-202ENST00000378023 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 JPX-201ENST00000414209 2194 ntTSL 2 BASIC8.62□□□□□ -1.03
HLA-CQ95604 ZNF41-201ENST00000313116 4297 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 AC073324.1-201ENST00000425993 1435 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 PHACTR2P1-201ENST00000605639 1414 ntBASIC8.62□□□□□ -1.03
HLA-CQ95604 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 LINC02067-201ENST00000473595 2845 ntTSL 2 BASIC8.62□□□□□ -1.03
HLA-CQ95604 GEMIN6-201ENST00000281950 3728 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 CLUAP1-212ENST00000576634 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-CQ95604 PTPRA-202ENST00000318266 3219 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
HLA-CQ95604 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-CQ95604 SOX2-OT-213ENST00000492337 2508 ntTSL 2 BASIC8.61□□□□□ -1.03
HLA-CQ95604 MEIS2-211ENST00000559085 2538 ntTSL 2 BASIC8.61□□□□□ -1.03
HLA-CQ95604 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC8.61□□□□□ -1.03
HLA-CQ95604 TBC1D8B-206ENST00000481617 4098 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-CQ95604 METTL7A-201ENST00000332160 3390 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-CQ95604 DNM1P46-201ENST00000341853 3831 ntTSL 2 BASIC8.61□□□□□ -1.03
HLA-CQ95604 IKZF2-202ENST00000374319 2001 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-CQ95604 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC8.61□□□□□ -1.03
HLA-CQ95604 FNIP1-203ENST00000510461 3845 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-CQ95604 SP110-215ENST00000540870 2032 ntTSL 2 BASIC8.61□□□□□ -1.03
HLA-CQ95604 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-CQ95604 AL590763.1-201ENST00000398297 1545 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 MTCO1P23-201ENST00000415223 1526 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 AC092652.3-201ENST00000473426 1517 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-CQ95604 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-CQ95604 THBS3-210ENST00000541576 3200 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-CQ95604 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC8.61□□□□□ -1.03
HLA-CQ95604 CTNNA2-217ENST00000540488 2792 ntTSL 5 BASIC8.61□□□□□ -1.03
HLA-CQ95604 RNA5SP302-201ENST00000364896 100 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-CQ95604 Y_RNA.402-201ENST00000383972 102 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 RN7SKP30-201ENST00000411373 334 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 EEF1A1P34-201ENST00000419888 1267 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC8.61□□□□□ -1.03
HLA-CQ95604 AC069154.1-201ENST00000432914 542 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC8.61□□□□□ -1.03
HLA-CQ95604 BMS1P10-201ENST00000443754 1120 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 AC097499.1-201ENST00000444277 208 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC8.61□□□□□ -1.03
HLA-CQ95604 RHEBP1-201ENST00000448647 556 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 VNN3-210ENST00000450865 596 ntTSL 4 BASIC8.61□□□□□ -1.03
HLA-CQ95604 RPL23AP35-201ENST00000451906 501 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC8.61□□□□□ -1.03
HLA-CQ95604 BZW1P1-201ENST00000454901 1240 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 SNORD42A-201ENST00000459584 64 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 NDUFB4P1-201ENST00000462398 381 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 AC115223.1-201ENST00000466377 870 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC8.61□□□□□ -1.03
HLA-CQ95604 AC113208.1-201ENST00000497944 318 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 AC122714.1-201ENST00000502510 459 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC8.61□□□□□ -1.03
HLA-CQ95604 PTGES3P3-201ENST00000511479 482 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 RNU6-1153P-201ENST00000516760 105 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 AP003385.2-201ENST00000524910 973 ntBASIC8.61□□□□□ -1.03
HLA-CQ95604 OR5AQ1P-201ENST00000527596 927 ntBASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms