Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 AL592429.1-201ENST00000403909 1473 ntBASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 RNA5SP188-201ENST00000362916 129 ntBASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 MIR99A-201ENST00000384906 81 ntBASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 RNU1-56P-201ENST00000391303 164 ntBASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 AC009362.1-201ENST00000427253 406 ntBASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 REG1CP-206ENST00000447469 496 ntBASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 AC009963.4-201ENST00000448535 339 ntBASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 AC133965.1-201ENST00000452984 354 ntBASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 RPL23AP68-201ENST00000480924 445 ntBASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 AC106785.4-201ENST00000569492 412 ntBASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 AC005332.9-201ENST00000620266 2921 ntBASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 AL359694.1-201ENST00000403247 604 ntBASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 RN7SL849P-201ENST00000485236 295 ntBASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 RPL21P42-201ENST00000488408 464 ntBASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 AC093815.1-201ENST00000508637 280 ntBASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 AL078623.1-201ENST00000602702 907 ntBASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 AL356986.1-201ENST00000604085 341 ntBASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 AC006328.2-201ENST00000623198 397 ntBASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 AC012005.2-201ENST00000624333 397 ntBASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 AC005858.3-201ENST00000624756 589 ntBASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 MSL3P1-202ENST00000440028 1468 ntBASIC6.92□□□□□ -1.3
CCDC50Q8IVM0 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms