Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.42□□□□□ -1.38
CDH13P55290 SUMO2P8-201ENST00000434672 286 ntBASIC6.42□□□□□ -1.38
CDH13P55290 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.42□□□□□ -1.38
CDH13P55290 RPSAP24-201ENST00000461543 873 ntBASIC6.42□□□□□ -1.38
CDH13P55290 RPL5P12-201ENST00000477071 851 ntBASIC6.42□□□□□ -1.38
CDH13P55290 AF305872.1-201ENST00000485217 471 ntBASIC6.42□□□□□ -1.38
CDH13P55290 RN7SL868P-201ENST00000485915 303 ntBASIC6.42□□□□□ -1.38
CDH13P55290 RPL7L1P7-201ENST00000509986 724 ntBASIC6.42□□□□□ -1.38
CDH13P55290 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.42□□□□□ -1.38
CDH13P55290 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.42□□□□□ -1.38
CDH13P55290 IGKV1D-32-201ENST00000517449 318 ntBASIC6.42□□□□□ -1.38
CDH13P55290 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.42□□□□□ -1.38
CDH13P55290 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.42□□□□□ -1.38
CDH13P55290 SETP17-201ENST00000534163 817 ntBASIC6.42□□□□□ -1.38
CDH13P55290 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.42□□□□□ -1.38
CDH13P55290 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.42□□□□□ -1.38
CDH13P55290 RPS27AP19-201ENST00000597285 458 ntBASIC6.42□□□□□ -1.38
CDH13P55290 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.42□□□□□ -1.38
CDH13P55290 AC025171.4-201ENST00000607250 1047 ntBASIC6.42□□□□□ -1.38
CDH13P55290 AP001264.1-201ENST00000620602 703 ntBASIC6.42□□□□□ -1.38
CDH13P55290 AP003400.2-201ENST00000624036 666 ntBASIC6.42□□□□□ -1.38
CDH13P55290 AC114546.4-201ENST00000624413 369 ntBASIC6.42□□□□□ -1.38
CDH13P55290 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
CDH13P55290 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
CDH13P55290 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.42□□□□□ -1.38
CDH13P55290 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.42□□□□□ -1.38
CDH13P55290 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH13P55290 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.42□□□□□ -1.38
CDH13P55290 TUBBP10-201ENST00000427668 1301 ntBASIC6.42□□□□□ -1.38
CDH13P55290 AC022613.3-201ENST00000560740 1346 ntBASIC6.42□□□□□ -1.38
CDH13P55290 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.42□□□□□ -1.38
CDH13P55290 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.42□□□□□ -1.38
CDH13P55290 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CDH13P55290 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CDH13P55290 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH13P55290 AC010624.4-201ENST00000597606 1351 ntBASIC6.42□□□□□ -1.38
CDH13P55290 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
CDH13P55290 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.42□□□□□ -1.38
CDH13P55290 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.41□□□□□ -1.38
CDH13P55290 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH13P55290 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.41□□□□□ -1.38
CDH13P55290 AC009135.2-201ENST00000624136 1768 ntBASIC6.41□□□□□ -1.38
CDH13P55290 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH13P55290 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.41□□□□□ -1.38
CDH13P55290 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH13P55290 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH13P55290 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH13P55290 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
CDH13P55290 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDH13P55290 AP004289.1-201ENST00000436307 2205 ntBASIC6.41□□□□□ -1.38
CDH13P55290 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDH13P55290 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.41□□□□□ -1.38
CDH13P55290 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH13P55290 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
CDH13P55290 RNA5SP152-201ENST00000365184 110 ntBASIC6.41□□□□□ -1.38
CDH13P55290 LDHAP5-201ENST00000394996 622 ntBASIC6.41□□□□□ -1.38
CDH13P55290 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH13P55290 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.41□□□□□ -1.38
CDH13P55290 AL023284.3-201ENST00000407767 334 ntBASIC6.41□□□□□ -1.38
CDH13P55290 FDPSP6-201ENST00000425091 512 ntBASIC6.41□□□□□ -1.38
CDH13P55290 AC097721.1-201ENST00000427150 1253 ntBASIC6.41□□□□□ -1.38
CDH13P55290 PUDPP2-201ENST00000431423 643 ntBASIC6.41□□□□□ -1.38
CDH13P55290 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CDH13P55290 AC239800.1-201ENST00000442049 719 ntBASIC6.41□□□□□ -1.38
CDH13P55290 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.41□□□□□ -1.38
CDH13P55290 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.41□□□□□ -1.38
CDH13P55290 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.41□□□□□ -1.38
CDH13P55290 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.41□□□□□ -1.38
CDH13P55290 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.41□□□□□ -1.38
CDH13P55290 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.41□□□□□ -1.38
CDH13P55290 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.41□□□□□ -1.38
CDH13P55290 AC007068.2-201ENST00000543168 395 ntBASIC6.41□□□□□ -1.38
CDH13P55290 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDH13P55290 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDH13P55290 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.41□□□□□ -1.38
CDH13P55290 ANP32BP1-202ENST00000568553 737 ntBASIC6.41□□□□□ -1.38
CDH13P55290 AP003115.1-201ENST00000569849 463 ntBASIC6.41□□□□□ -1.38
CDH13P55290 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.41□□□□□ -1.38
CDH13P55290 RN7SL131P-201ENST00000579043 256 ntBASIC6.41□□□□□ -1.38
CDH13P55290 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.41□□□□□ -1.38
CDH13P55290 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.41□□□□□ -1.38
CDH13P55290 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.41□□□□□ -1.38
CDH13P55290 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.41□□□□□ -1.38
CDH13P55290 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.41□□□□□ -1.38
CDH13P55290 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CDH13P55290 AL121936.2-201ENST00000641935 662 ntBASIC6.41□□□□□ -1.38
CDH13P55290 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDH13P55290 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH13P55290 AL355377.1-201ENST00000621125 1653 ntBASIC6.41□□□□□ -1.38
CDH13P55290 AL512353.3-201ENST00000417517 1326 ntBASIC6.41□□□□□ -1.38
CDH13P55290 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.41□□□□□ -1.38
CDH13P55290 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.41□□□□□ -1.38
CDH13P55290 AC079248.1-201ENST00000427568 1546 ntBASIC6.4□□□□□ -1.38
CDH13P55290 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDH13P55290 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
CDH13P55290 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.4□□□□□ -1.38
CDH13P55290 AL022323.4-201ENST00000623980 13120 ntBASIC6.4□□□□□ -1.38
CDH13P55290 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.4□□□□□ -1.38
CDH13P55290 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDH13P55290 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms