Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CDH6P55285 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.79□□□□□ -1.32
CDH6P55285 PPIAP24-201ENST00000328558 471 ntBASIC6.79□□□□□ -1.32
CDH6P55285 RN7SKP118-201ENST00000364331 330 ntBASIC6.79□□□□□ -1.32
CDH6P55285 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.79□□□□□ -1.32
CDH6P55285 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.79□□□□□ -1.32
CDH6P55285 AC026310.1-201ENST00000396004 378 ntBASIC6.79□□□□□ -1.32
CDH6P55285 AL050335.1-201ENST00000396909 869 ntBASIC6.79□□□□□ -1.32
CDH6P55285 RPL5P20-201ENST00000403848 896 ntBASIC6.79□□□□□ -1.32
CDH6P55285 AL353133.1-201ENST00000407695 401 ntBASIC6.79□□□□□ -1.32
CDH6P55285 RPL36P18-201ENST00000419316 318 ntBASIC6.79□□□□□ -1.32
CDH6P55285 SPATA20P1-201ENST00000423089 438 ntBASIC6.79□□□□□ -1.32
CDH6P55285 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.79□□□□□ -1.32
CDH6P55285 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CDH6P55285 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.79□□□□□ -1.32
CDH6P55285 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.79□□□□□ -1.32
CDH6P55285 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.79□□□□□ -1.32
CDH6P55285 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.79□□□□□ -1.32
CDH6P55285 RNA5SP96-201ENST00000516041 107 ntBASIC6.79□□□□□ -1.32
CDH6P55285 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.79□□□□□ -1.32
CDH6P55285 CASP1P2-201ENST00000526830 1258 ntBASIC6.79□□□□□ -1.32
CDH6P55285 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.79□□□□□ -1.32
CDH6P55285 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDH6P55285 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.79□□□□□ -1.32
CDH6P55285 RN7SL208P-201ENST00000577964 296 ntBASIC6.79□□□□□ -1.32
CDH6P55285 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC6.79□□□□□ -1.32
CDH6P55285 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.79□□□□□ -1.32
CDH6P55285 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.79□□□□□ -1.32
CDH6P55285 AL683813.2-201ENST00000605245 502 ntBASIC6.79□□□□□ -1.32
CDH6P55285 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.79□□□□□ -1.32
CDH6P55285 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.79□□□□□ -1.32
CDH6P55285 RAB28P4-201ENST00000622233 665 ntBASIC6.79□□□□□ -1.32
CDH6P55285 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.79□□□□□ -1.32
CDH6P55285 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
CDH6P55285 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CDH6P55285 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDH6P55285 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CDH6P55285 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDH6P55285 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDH6P55285 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CDH6P55285 AC107980.1-201ENST00000558671 3355 ntBASIC6.78□□□□□ -1.32
CDH6P55285 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH6P55285 AC009779.8-201ENST00000641684 4384 ntBASIC6.78□□□□□ -1.32
CDH6P55285 AC074141.1-201ENST00000588129 2995 ntBASIC6.78□□□□□ -1.32
CDH6P55285 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH6P55285 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.78□□□□□ -1.32
CDH6P55285 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH6P55285 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDH6P55285 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH6P55285 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH6P55285 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH6P55285 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.78□□□□□ -1.32
CDH6P55285 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CDH6P55285 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CDH6P55285 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CDH6P55285 RNA5SP140-201ENST00000364524 92 ntBASIC6.78□□□□□ -1.32
CDH6P55285 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.78□□□□□ -1.32
CDH6P55285 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.78□□□□□ -1.32
CDH6P55285 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.78□□□□□ -1.32
CDH6P55285 CDC42P6-201ENST00000421246 576 ntBASIC6.78□□□□□ -1.32
CDH6P55285 CYCSP52-201ENST00000422857 310 ntBASIC6.78□□□□□ -1.32
CDH6P55285 AP003385.1-201ENST00000426387 893 ntBASIC6.78□□□□□ -1.32
CDH6P55285 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC6.78□□□□□ -1.32
CDH6P55285 RPS19P6-201ENST00000441327 433 ntBASIC6.78□□□□□ -1.32
CDH6P55285 CT45A11P-201ENST00000448043 1134 ntBASIC6.78□□□□□ -1.32
CDH6P55285 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDH6P55285 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.78□□□□□ -1.32
CDH6P55285 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.78□□□□□ -1.32
CDH6P55285 RPL5P14-201ENST00000494197 878 ntBASIC6.78□□□□□ -1.32
CDH6P55285 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.78□□□□□ -1.32
CDH6P55285 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.78□□□□□ -1.32
CDH6P55285 SCARNA5-201ENST00000516201 276 ntBASIC6.78□□□□□ -1.32
CDH6P55285 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH6P55285 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC6.78□□□□□ -1.32
CDH6P55285 AC084337.1-201ENST00000524809 686 ntBASIC6.78□□□□□ -1.32
CDH6P55285 KCTD9P4-201ENST00000526766 1166 ntBASIC6.78□□□□□ -1.32
CDH6P55285 AC027667.1-201ENST00000545814 304 ntBASIC6.78□□□□□ -1.32
CDH6P55285 CHEK2P2-201ENST00000554701 672 ntBASIC6.78□□□□□ -1.32
CDH6P55285 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.78□□□□□ -1.32
CDH6P55285 NIFKP4-201ENST00000567275 1192 ntBASIC6.78□□□□□ -1.32
CDH6P55285 AC068408.1-201ENST00000577406 1144 ntBASIC6.78□□□□□ -1.32
CDH6P55285 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CDH6P55285 RPL7AP69-201ENST00000595306 806 ntBASIC6.78□□□□□ -1.32
CDH6P55285 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.78□□□□□ -1.32
CDH6P55285 AC116165.3-201ENST00000614524 400 ntBASIC6.78□□□□□ -1.32
CDH6P55285 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH6P55285 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH6P55285 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.78□□□□□ -1.32
CDH6P55285 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.78□□□□□ -1.32
CDH6P55285 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.78□□□□□ -1.32
CDH6P55285 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.78□□□□□ -1.32
CDH6P55285 DOCK11P1-201ENST00000553480 5932 ntBASIC6.78□□□□□ -1.32
CDH6P55285 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDH6P55285 OLMALINC-203ENST00000641087 3779 ntBASIC6.78□□□□□ -1.32
CDH6P55285 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.78□□□□□ -1.32
CDH6P55285 AC105749.1-201ENST00000631338 2008 ntBASIC6.77□□□□□ -1.32
CDH6P55285 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.32
CDH6P55285 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
CDH6P55285 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
CDH6P55285 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms