Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LHX1P48742 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
LHX1P48742 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
LHX1P48742 OR2M1P-201ENST00000318104 951 ntBASIC6.94□□□□□ -1.3
LHX1P48742 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
LHX1P48742 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LHX1P48742 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.94□□□□□ -1.3
LHX1P48742 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.94□□□□□ -1.3
LHX1P48742 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.94□□□□□ -1.3
LHX1P48742 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.94□□□□□ -1.3
LHX1P48742 GTF3AP6-201ENST00000432585 986 ntBASIC6.94□□□□□ -1.3
LHX1P48742 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LHX1P48742 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.94□□□□□ -1.3
LHX1P48742 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.94□□□□□ -1.3
LHX1P48742 SNORA74.1-201ENST00000516320 180 ntBASIC6.94□□□□□ -1.3
LHX1P48742 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.94□□□□□ -1.3
LHX1P48742 IGLV3-6-201ENST00000523937 250 ntBASIC6.94□□□□□ -1.3
LHX1P48742 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.94□□□□□ -1.3
LHX1P48742 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.94□□□□□ -1.3
LHX1P48742 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.94□□□□□ -1.3
LHX1P48742 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.94□□□□□ -1.3
LHX1P48742 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.94□□□□□ -1.3
LHX1P48742 AC121758.1-202ENST00000556917 658 ntBASIC6.94□□□□□ -1.3
LHX1P48742 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.94□□□□□ -1.3
LHX1P48742 AC026898.1-201ENST00000586404 571 ntBASIC6.94□□□□□ -1.3
LHX1P48742 AL589765.6-201ENST00000601909 549 ntBASIC6.94□□□□□ -1.3
LHX1P48742 WBP1LP12-201ENST00000604449 331 ntBASIC6.94□□□□□ -1.3
LHX1P48742 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.94□□□□□ -1.3
LHX1P48742 USP9YP3-201ENST00000434481 1766 ntBASIC6.94□□□□□ -1.3
LHX1P48742 LINC01613-201ENST00000561476 2780 ntBASIC6.94□□□□□ -1.3
LHX1P48742 RPL31P11-201ENST00000426558 1558 ntBASIC6.94□□□□□ -1.3
LHX1P48742 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.94□□□□□ -1.3
LHX1P48742 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.94□□□□□ -1.3
LHX1P48742 FO082842.1-201ENST00000423552 1370 ntBASIC6.94□□□□□ -1.3
LHX1P48742 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LHX1P48742 AC092725.2-201ENST00000567658 1389 ntBASIC6.94□□□□□ -1.3
LHX1P48742 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LHX1P48742 MROH3P-201ENST00000435735 2676 ntBASIC6.94□□□□□ -1.3
LHX1P48742 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.93□□□□□ -1.3
LHX1P48742 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
LHX1P48742 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LHX1P48742 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LHX1P48742 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
LHX1P48742 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LHX1P48742 AL136531.3-201ENST00000624378 3658 ntBASIC6.93□□□□□ -1.3
LHX1P48742 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
LHX1P48742 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LHX1P48742 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
LHX1P48742 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
LHX1P48742 RNA5SP512-201ENST00000364550 120 ntBASIC6.93□□□□□ -1.3
LHX1P48742 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.93□□□□□ -1.3
LHX1P48742 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
LHX1P48742 AL391419.1-201ENST00000398901 1275 ntBASIC6.93□□□□□ -1.3
LHX1P48742 PSMA6P1-201ENST00000400275 741 ntBASIC6.93□□□□□ -1.3
LHX1P48742 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
LHX1P48742 AC068138.1-201ENST00000412635 217 ntBASIC6.93□□□□□ -1.3
LHX1P48742 TRGV5P-201ENST00000419915 354 ntBASIC6.93□□□□□ -1.3
LHX1P48742 CYCSP52-201ENST00000422857 310 ntBASIC6.93□□□□□ -1.3
LHX1P48742 AL139415.1-201ENST00000424862 352 ntBASIC6.93□□□□□ -1.3
LHX1P48742 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.93□□□□□ -1.3
LHX1P48742 ARMC4P1-201ENST00000438905 707 ntBASIC6.93□□□□□ -1.3
LHX1P48742 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.93□□□□□ -1.3
LHX1P48742 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.93□□□□□ -1.3
LHX1P48742 RN7SL39P-201ENST00000462264 297 ntBASIC6.93□□□□□ -1.3
LHX1P48742 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.93□□□□□ -1.3
LHX1P48742 RPL23AP64-201ENST00000469465 435 ntBASIC6.93□□□□□ -1.3
LHX1P48742 GUSBP9-201ENST00000510138 584 ntBASIC6.93□□□□□ -1.3
LHX1P48742 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.93□□□□□ -1.3
LHX1P48742 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.93□□□□□ -1.3
LHX1P48742 AL133399.1-201ENST00000527476 298 ntBASIC6.93□□□□□ -1.3
LHX1P48742 OR4A41P-201ENST00000533053 928 ntBASIC6.93□□□□□ -1.3
LHX1P48742 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.93□□□□□ -1.3
LHX1P48742 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.93□□□□□ -1.3
LHX1P48742 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.93□□□□□ -1.3
LHX1P48742 RN7SL230P-201ENST00000580835 303 ntBASIC6.93□□□□□ -1.3
LHX1P48742 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.93□□□□□ -1.3
LHX1P48742 AL953862.2-201ENST00000603089 820 ntBASIC6.93□□□□□ -1.3
LHX1P48742 AC020765.1-201ENST00000604296 328 ntBASIC6.93□□□□□ -1.3
LHX1P48742 AC009779.8-202ENST00000607990 932 ntBASIC6.93□□□□□ -1.3
LHX1P48742 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.93□□□□□ -1.3
LHX1P48742 LINC02495-203ENST00000636704 242 ntBASIC6.93□□□□□ -1.3
LHX1P48742 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.93□□□□□ -1.3
LHX1P48742 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LHX1P48742 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.93□□□□□ -1.3
LHX1P48742 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LHX1P48742 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.93□□□□□ -1.3
LHX1P48742 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
LHX1P48742 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.93□□□□□ -1.3
LHX1P48742 AC009120.2-204ENST00000621548 2032 ntBASIC6.93□□□□□ -1.3
LHX1P48742 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.92□□□□□ -1.3
LHX1P48742 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.92□□□□□ -1.3
LHX1P48742 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LHX1P48742 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LHX1P48742 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
LHX1P48742 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.92□□□□□ -1.3
LHX1P48742 AC127070.3-201ENST00000503695 3263 ntBASIC6.92□□□□□ -1.3
LHX1P48742 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
LHX1P48742 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
LHX1P48742 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.92□□□□□ -1.3
LHX1P48742 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms