Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
PTPN1P18031 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PTPN1P18031 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.33□□□□□ -1.24
PTPN1P18031 RPL31P11-201ENST00000426558 1558 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PTPN1P18031 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.33□□□□□ -1.24
PTPN1P18031 MTCO1P15-201ENST00000529569 1526 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
PTPN1P18031 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PTPN1P18031 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PTPN1P18031 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.33□□□□□ -1.24
PTPN1P18031 AC097634.1-201ENST00000604491 2467 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PTPN1P18031 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
PTPN1P18031 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PTPN1P18031 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PTPN1P18031 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PTPN1P18031 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PTPN1P18031 RPL9P21-201ENST00000392269 505 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC7.33□□□□□ -1.24
PTPN1P18031 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.33□□□□□ -1.24
PTPN1P18031 MIR1204-201ENST00000408388 67 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 RN7SKP91-201ENST00000410852 288 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC7.33□□□□□ -1.24
PTPN1P18031 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PTPN1P18031 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.33□□□□□ -1.24
PTPN1P18031 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC7.33□□□□□ -1.24
PTPN1P18031 AL672212.1-201ENST00000422246 400 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 EIF4A1P2-201ENST00000422633 1220 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 E2F6P1-201ENST00000428850 745 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 CETN4P-201ENST00000432407 469 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC7.33□□□□□ -1.24
PTPN1P18031 RPL3P11-201ENST00000434028 1146 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 AL645931.1-201ENST00000439737 410 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC7.33□□□□□ -1.24
PTPN1P18031 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC7.33□□□□□ -1.24
PTPN1P18031 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC7.33□□□□□ -1.24
PTPN1P18031 NMNAT1P3-201ENST00000457517 888 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PTPN1P18031 RN7SL267P-201ENST00000485107 261 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 RN7SL143P-201ENST00000496780 297 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 AC021146.5-201ENST00000503544 545 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 RNA5SP278-201ENST00000517055 102 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC7.33□□□□□ -1.24
PTPN1P18031 VBP1-203ENST00000535916 944 ntTSL 2 BASIC7.33□□□□□ -1.24
PTPN1P18031 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC7.33□□□□□ -1.24
PTPN1P18031 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC7.33□□□□□ -1.24
PTPN1P18031 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC7.33□□□□□ -1.24
PTPN1P18031 AL365223.1-201ENST00000574864 1297 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 AC020914.7-201ENST00000594477 545 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PTPN1P18031 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.33□□□□□ -1.24
PTPN1P18031 AC074276.2-201ENST00000619891 348 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.33□□□□□ -1.24
PTPN1P18031 AC097460.3-201ENST00000623099 442 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 TSHZ2-205ENST00000626626 670 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC7.33□□□□□ -1.24
PTPN1P18031 TEX41-271ENST00000628213 993 ntTSL 5 BASIC7.33□□□□□ -1.24
PTPN1P18031 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.33□□□□□ -1.24
PTPN1P18031 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC7.33□□□□□ -1.24
PTPN1P18031 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PTPN1P18031 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PTPN1P18031 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PTPN1P18031 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
PTPN1P18031 AC092821.2-201ENST00000545710 2042 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PTPN1P18031 DDX6P1-205ENST00000441966 1436 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PTPN1P18031 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PTPN1P18031 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PTPN1P18031 AL512329.1-201ENST00000404600 1592 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 AC095038.1-201ENST00000429248 1591 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 AC104837.1-201ENST00000444644 1587 ntBASIC7.33□□□□□ -1.24
PTPN1P18031 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PTPN1P18031 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PTPN1P18031 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
PTPN1P18031 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PTPN1P18031 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
PTPN1P18031 AL645568.2-201ENST00000432815 1337 ntBASIC7.32□□□□□ -1.24
PTPN1P18031 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PTPN1P18031 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PTPN1P18031 DLEU2L-201ENST00000371086 3555 ntBASIC7.32□□□□□ -1.24
PTPN1P18031 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
PTPN1P18031 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
PTPN1P18031 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.32□□□□□ -1.24
PTPN1P18031 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PTPN1P18031 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PTPN1P18031 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.32□□□□□ -1.24
PTPN1P18031 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PTPN1P18031 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.32□□□□□ -1.24
PTPN1P18031 AL353763.1-201ENST00000624467 1628 ntBASIC7.32□□□□□ -1.24
PTPN1P18031 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.32□□□□□ -1.24
PTPN1P18031 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
PTPN1P18031 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
PTPN1P18031 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.32□□□□□ -1.24
PTPN1P18031 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
PTPN1P18031 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
PTPN1P18031 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC7.32□□□□□ -1.24
PTPN1P18031 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC7.32□□□□□ -1.24
PTPN1P18031 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms