Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC7.17□□□□□ -1.26
TPM1P09493 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.17□□□□□ -1.26
TPM1P09493 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.17□□□□□ -1.26
TPM1P09493 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.17□□□□□ -1.26
TPM1P09493 PFN1P11-201ENST00000445829 389 ntBASIC7.17□□□□□ -1.26
TPM1P09493 RN7SL445P-201ENST00000495609 293 ntBASIC7.17□□□□□ -1.26
TPM1P09493 AC073916.1-201ENST00000545095 130 ntBASIC7.17□□□□□ -1.26
TPM1P09493 AC007494.1-201ENST00000562293 760 ntBASIC7.17□□□□□ -1.26
TPM1P09493 MIR4262-201ENST00000578394 54 ntBASIC7.17□□□□□ -1.26
TPM1P09493 AC233702.7-202ENST00000582941 211 ntBASIC7.17□□□□□ -1.26
TPM1P09493 OR7A8P-201ENST00000595427 913 ntBASIC7.17□□□□□ -1.26
TPM1P09493 AL592504.1-201ENST00000605319 439 ntBASIC7.17□□□□□ -1.26
TPM1P09493 AC024589.2-201ENST00000605642 1294 ntBASIC7.17□□□□□ -1.26
TPM1P09493 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.17□□□□□ -1.26
TPM1P09493 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC7.17□□□□□ -1.26
TPM1P09493 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
TPM1P09493 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
TPM1P09493 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TPM1P09493 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC7.17□□□□□ -1.26
TPM1P09493 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.17□□□□□ -1.26
TPM1P09493 MSL3P1-202ENST00000440028 1468 ntBASIC7.17□□□□□ -1.26
TPM1P09493 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.17□□□□□ -1.26
TPM1P09493 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TPM1P09493 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
TPM1P09493 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.16□□□□□ -1.26
TPM1P09493 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TPM1P09493 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
TPM1P09493 AP001157.1-201ENST00000550837 2339 ntBASIC7.16□□□□□ -1.26
TPM1P09493 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.16□□□□□ -1.26
TPM1P09493 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
TPM1P09493 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TPM1P09493 SNORA38B-201ENST00000363524 131 ntBASIC7.16□□□□□ -1.26
TPM1P09493 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC7.16□□□□□ -1.26
TPM1P09493 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC7.16□□□□□ -1.26
TPM1P09493 RN7SKP268-201ENST00000411107 316 ntBASIC7.16□□□□□ -1.26
TPM1P09493 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.16□□□□□ -1.26
TPM1P09493 SNX18P13-201ENST00000412442 529 ntBASIC7.16□□□□□ -1.26
TPM1P09493 CYCSP52-201ENST00000422857 310 ntBASIC7.16□□□□□ -1.26
TPM1P09493 NPM1P25-201ENST00000429734 854 ntBASIC7.16□□□□□ -1.26
TPM1P09493 RPS10P21-201ENST00000430654 475 ntBASIC7.16□□□□□ -1.26
TPM1P09493 AC003989.1-201ENST00000434569 565 ntBASIC7.16□□□□□ -1.26
TPM1P09493 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.16□□□□□ -1.26
TPM1P09493 BX679664.2-201ENST00000439282 283 ntBASIC7.16□□□□□ -1.26
TPM1P09493 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.16□□□□□ -1.26
TPM1P09493 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC7.16□□□□□ -1.26
TPM1P09493 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC7.16□□□□□ -1.26
TPM1P09493 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.16□□□□□ -1.26
TPM1P09493 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.16□□□□□ -1.26
TPM1P09493 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.16□□□□□ -1.26
TPM1P09493 PPIAP6-201ENST00000557078 499 ntBASIC7.16□□□□□ -1.26
TPM1P09493 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.16□□□□□ -1.26
TPM1P09493 AP003115.1-201ENST00000569849 463 ntBASIC7.16□□□□□ -1.26
TPM1P09493 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.16□□□□□ -1.26
TPM1P09493 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC7.16□□□□□ -1.26
TPM1P09493 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.16□□□□□ -1.26
TPM1P09493 AC104117.5-201ENST00000606195 547 ntBASIC7.16□□□□□ -1.26
TPM1P09493 BX005040.2-201ENST00000620504 370 ntBASIC7.16□□□□□ -1.26
TPM1P09493 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.16□□□□□ -1.26
TPM1P09493 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TPM1P09493 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.16□□□□□ -1.26
TPM1P09493 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.16□□□□□ -1.26
TPM1P09493 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TPM1P09493 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.26
TPM1P09493 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.16□□□□□ -1.26
TPM1P09493 AC130360.2-201ENST00000533477 1556 ntBASIC7.16□□□□□ -1.26
TPM1P09493 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
TPM1P09493 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TPM1P09493 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.15□□□□□ -1.26
TPM1P09493 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC7.15□□□□□ -1.26
TPM1P09493 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
TPM1P09493 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TPM1P09493 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TPM1P09493 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
TPM1P09493 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
TPM1P09493 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TPM1P09493 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
TPM1P09493 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TPM1P09493 RN7SKP161-201ENST00000411110 305 ntBASIC7.15□□□□□ -1.26
TPM1P09493 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC7.15□□□□□ -1.26
TPM1P09493 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.15□□□□□ -1.26
TPM1P09493 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.15□□□□□ -1.26
TPM1P09493 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC7.15□□□□□ -1.26
TPM1P09493 SNX18P26-201ENST00000458433 740 ntBASIC7.15□□□□□ -1.26
TPM1P09493 RN7SL390P-201ENST00000470634 284 ntBASIC7.15□□□□□ -1.26
TPM1P09493 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.15□□□□□ -1.26
TPM1P09493 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.15□□□□□ -1.26
TPM1P09493 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.15□□□□□ -1.26
TPM1P09493 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC7.15□□□□□ -1.26
TPM1P09493 AP006437.1-202ENST00000530327 933 ntBASIC7.15□□□□□ -1.26
TPM1P09493 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.15□□□□□ -1.26
TPM1P09493 AL132640.1-201ENST00000559594 619 ntBASIC7.15□□□□□ -1.26
TPM1P09493 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.15□□□□□ -1.26
TPM1P09493 PRR13P3-201ENST00000603578 376 ntBASIC7.15□□□□□ -1.26
TPM1P09493 ACTG1P22-201ENST00000603793 1099 ntBASIC7.15□□□□□ -1.26
TPM1P09493 AC122710.3-201ENST00000606566 541 ntBASIC7.15□□□□□ -1.26
TPM1P09493 PTCHD3P1-201ENST00000612350 537 ntBASIC7.15□□□□□ -1.26
TPM1P09493 AP001264.1-201ENST00000620602 703 ntBASIC7.15□□□□□ -1.26
TPM1P09493 AC106782.7-201ENST00000624024 418 ntBASIC7.15□□□□□ -1.26
TPM1P09493 AC133555.5-201ENST00000624430 418 ntBASIC7.15□□□□□ -1.26
TPM1P09493 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms