Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RB1P06400 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RB1P06400 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RB1P06400 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.09□□□□□ -1.27
RB1P06400 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.09□□□□□ -1.27
RB1P06400 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.09□□□□□ -1.27
RB1P06400 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.09□□□□□ -1.27
RB1P06400 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.09□□□□□ -1.27
RB1P06400 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
RB1P06400 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
RB1P06400 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
RB1P06400 AC003045.1-201ENST00000398779 713 ntBASIC7.09□□□□□ -1.27
RB1P06400 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.09□□□□□ -1.27
RB1P06400 RPL21P50-201ENST00000417698 477 ntBASIC7.09□□□□□ -1.27
RB1P06400 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.09□□□□□ -1.27
RB1P06400 RPL7AP14-201ENST00000424041 802 ntBASIC7.09□□□□□ -1.27
RB1P06400 AL354707.3-201ENST00000427308 331 ntBASIC7.09□□□□□ -1.27
RB1P06400 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.09□□□□□ -1.27
RB1P06400 AL136455.1-201ENST00000441083 1240 ntBASIC7.09□□□□□ -1.27
RB1P06400 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.09□□□□□ -1.27
RB1P06400 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.09□□□□□ -1.27
RB1P06400 TVP23CP1-201ENST00000450317 639 ntBASIC7.09□□□□□ -1.27
RB1P06400 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RB1P06400 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.09□□□□□ -1.27
RB1P06400 H3F3AP3-201ENST00000497682 407 ntBASIC7.09□□□□□ -1.27
RB1P06400 SSX8-201ENST00000506270 579 ntBASIC7.09□□□□□ -1.27
RB1P06400 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.09□□□□□ -1.27
RB1P06400 ZNF519P4-201ENST00000514008 125 ntBASIC7.09□□□□□ -1.27
RB1P06400 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC7.09□□□□□ -1.27
RB1P06400 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RB1P06400 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.09□□□□□ -1.27
RB1P06400 AC090115.2-201ENST00000548060 883 ntBASIC7.09□□□□□ -1.27
RB1P06400 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.09□□□□□ -1.27
RB1P06400 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.09□□□□□ -1.27
RB1P06400 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.09□□□□□ -1.27
RB1P06400 AP003115.1-201ENST00000569849 463 ntBASIC7.09□□□□□ -1.27
RB1P06400 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.09□□□□□ -1.27
RB1P06400 U1.41-201ENST00000617626 165 ntBASIC7.09□□□□□ -1.27
RB1P06400 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RB1P06400 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RB1P06400 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.09□□□□□ -1.27
RB1P06400 FLJ42393-201ENST00000623801 2270 ntBASIC7.09□□□□□ -1.27
RB1P06400 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RB1P06400 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RB1P06400 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
RB1P06400 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RB1P06400 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.09□□□□□ -1.28
RB1P06400 AC068733.2-201ENST00000605434 1418 ntBASIC7.09□□□□□ -1.28
RB1P06400 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
RB1P06400 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
RB1P06400 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
RB1P06400 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
RB1P06400 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.09□□□□□ -1.28
RB1P06400 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
RB1P06400 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RB1P06400 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RB1P06400 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
RB1P06400 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.08□□□□□ -1.28
RB1P06400 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.08□□□□□ -1.28
RB1P06400 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.08□□□□□ -1.28
RB1P06400 AC007406.5-201ENST00000570140 3170 ntBASIC7.08□□□□□ -1.28
RB1P06400 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.08□□□□□ -1.28
RB1P06400 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.08□□□□□ -1.28
RB1P06400 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RB1P06400 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
RB1P06400 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RB1P06400 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.08□□□□□ -1.28
RB1P06400 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
RB1P06400 AC083862.1-201ENST00000427378 1242 ntBASIC7.08□□□□□ -1.28
RB1P06400 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.08□□□□□ -1.28
RB1P06400 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.08□□□□□ -1.28
RB1P06400 RN7SL382P-201ENST00000482631 282 ntBASIC7.08□□□□□ -1.28
RB1P06400 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RB1P06400 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RB1P06400 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RB1P06400 HMGN1P17-201ENST00000513734 295 ntBASIC7.08□□□□□ -1.28
RB1P06400 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.08□□□□□ -1.28
RB1P06400 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.08□□□□□ -1.28
RB1P06400 AC012146.2-201ENST00000576545 416 ntBASIC7.08□□□□□ -1.28
RB1P06400 AC067773.1-201ENST00000603284 1094 ntBASIC7.08□□□□□ -1.28
RB1P06400 AL096712.1-201ENST00000614561 159 ntBASIC7.08□□□□□ -1.28
RB1P06400 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
RB1P06400 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
RB1P06400 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
RB1P06400 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RB1P06400 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
RB1P06400 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.08□□□□□ -1.28
RB1P06400 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RB1P06400 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.08□□□□□ -1.28
RB1P06400 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
RB1P06400 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.08□□□□□ -1.28
RB1P06400 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
RB1P06400 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.08□□□□□ -1.28
RB1P06400 AL359396.1-201ENST00000623151 2376 ntBASIC7.08□□□□□ -1.28
RB1P06400 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
RB1P06400 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
RB1P06400 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
RB1P06400 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
RB1P06400 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RB1P06400 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms