Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-DOAP06340 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 TRIM60P13-201ENST00000432350 1283 ntBASIC7.77□□□□□ -1.17
HLA-DOAP06340 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-DOAP06340 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 SDR42E1P3-201ENST00000438345 502 ntBASIC7.77□□□□□ -1.17
HLA-DOAP06340 RPSAP40-201ENST00000442343 891 ntBASIC7.77□□□□□ -1.17
HLA-DOAP06340 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 AC002486.2-201ENST00000447806 590 ntBASIC7.77□□□□□ -1.17
HLA-DOAP06340 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 RPL5P14-201ENST00000494197 878 ntBASIC7.77□□□□□ -1.17
HLA-DOAP06340 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 AC018797.1-201ENST00000510791 255 ntBASIC7.77□□□□□ -1.17
HLA-DOAP06340 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 AC023245.2-201ENST00000530760 2978 ntBASIC7.77□□□□□ -1.17
HLA-DOAP06340 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 AC023968.1-201ENST00000560719 475 ntBASIC7.77□□□□□ -1.17
HLA-DOAP06340 AL078601.3-201ENST00000573303 535 ntBASIC7.77□□□□□ -1.17
HLA-DOAP06340 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-DOAP06340 AC074141.1-201ENST00000588129 2995 ntBASIC7.77□□□□□ -1.17
HLA-DOAP06340 MIR6721-201ENST00000617181 87 ntBASIC7.77□□□□□ -1.17
HLA-DOAP06340 MIR6085-201ENST00000618314 110 ntBASIC7.77□□□□□ -1.17
HLA-DOAP06340 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-DOAP06340 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-DOAP06340 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-DOAP06340 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 API5P1-201ENST00000424316 1510 ntBASIC7.77□□□□□ -1.17
HLA-DOAP06340 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-DOAP06340 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 AP003119.3-201ENST00000566747 4192 ntBASIC7.77□□□□□ -1.17
HLA-DOAP06340 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
HLA-DOAP06340 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
HLA-DOAP06340 RPL11P4-201ENST00000332269 436 ntBASIC7.76□□□□□ -1.17
HLA-DOAP06340 RN7SKP237-201ENST00000364663 301 ntBASIC7.76□□□□□ -1.17
HLA-DOAP06340 RNA5SP279-201ENST00000365513 117 ntBASIC7.76□□□□□ -1.17
HLA-DOAP06340 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 RBBP4P5-201ENST00000398583 1266 ntBASIC7.76□□□□□ -1.17
HLA-DOAP06340 USP9YP19-201ENST00000412165 485 ntBASIC7.76□□□□□ -1.17
HLA-DOAP06340 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 FABP5P1-201ENST00000423401 411 ntBASIC7.76□□□□□ -1.17
HLA-DOAP06340 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 RN7SL834P-201ENST00000461450 286 ntBASIC7.76□□□□□ -1.17
HLA-DOAP06340 AC021006.1-201ENST00000489849 553 ntBASIC7.76□□□□□ -1.17
HLA-DOAP06340 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
HLA-DOAP06340 RNA5SP441-201ENST00000516809 88 ntBASIC7.76□□□□□ -1.17
HLA-DOAP06340 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
HLA-DOAP06340 AC019227.1-201ENST00000526902 510 ntBASIC7.76□□□□□ -1.17
HLA-DOAP06340 AL133399.1-201ENST00000527476 298 ntBASIC7.76□□□□□ -1.17
HLA-DOAP06340 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
HLA-DOAP06340 OR1E3-201ENST00000575608 948 ntBASIC7.76□□□□□ -1.17
HLA-DOAP06340 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 AC092574.1-201ENST00000609771 420 ntBASIC7.76□□□□□ -1.17
HLA-DOAP06340 uc_338.31-201ENST00000615595 186 ntBASIC7.76□□□□□ -1.17
HLA-DOAP06340 AP001052.1-201ENST00000626421 99 ntBASIC7.76□□□□□ -1.17
HLA-DOAP06340 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
HLA-DOAP06340 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
HLA-DOAP06340 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
HLA-DOAP06340 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
HLA-DOAP06340 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.76□□□□□ -1.17
HLA-DOAP06340 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-DOAP06340 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC7.75□□□□□ -1.17
HLA-DOAP06340 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-DOAP06340 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.75□□□□□ -1.17
HLA-DOAP06340 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-DOAP06340 AC017035.1-201ENST00000411999 1115 ntBASIC7.75□□□□□ -1.17
HLA-DOAP06340 Z68868.1-201ENST00000429048 544 ntBASIC7.75□□□□□ -1.17
HLA-DOAP06340 UBE2V2P3-201ENST00000433562 437 ntBASIC7.75□□□□□ -1.17
HLA-DOAP06340 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.75□□□□□ -1.17
HLA-DOAP06340 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.75□□□□□ -1.17
HLA-DOAP06340 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
HLA-DOAP06340 MTND2P39-201ENST00000457230 764 ntBASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms