Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 NR1I3-228ENST00000511676 1061 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USB1Q9BQ65 MTND6P2-201ENST00000512226 524 ntBASIC8.07□□□□□ -1.12
USB1Q9BQ65 NR1I3-232ENST00000512372 861 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USB1Q9BQ65 IGHVIII-51-1-201ENST00000519403 302 ntBASIC8.07□□□□□ -1.12
USB1Q9BQ65 AC105029.1-201ENST00000520250 669 ntBASIC8.07□□□□□ -1.12
USB1Q9BQ65 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC8.07□□□□□ -1.12
USB1Q9BQ65 AC022878.1-201ENST00000530684 149 ntBASIC8.07□□□□□ -1.12
USB1Q9BQ65 OR6M3P-201ENST00000531567 700 ntBASIC8.07□□□□□ -1.12
USB1Q9BQ65 AC090625.2-201ENST00000534165 518 ntTSL 3 BASIC8.07□□□□□ -1.12
USB1Q9BQ65 NXPE2P1-201ENST00000543705 726 ntBASIC8.07□□□□□ -1.12
USB1Q9BQ65 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USB1Q9BQ65 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC8.07□□□□□ -1.12
USB1Q9BQ65 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
USB1Q9BQ65 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USB1Q9BQ65 AC004147.5-201ENST00000581727 536 ntBASIC8.07□□□□□ -1.12
USB1Q9BQ65 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC8.07□□□□□ -1.12
USB1Q9BQ65 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC8.07□□□□□ -1.12
USB1Q9BQ65 RPL12P25-202ENST00000598100 674 ntBASIC8.07□□□□□ -1.12
USB1Q9BQ65 AC136475.8-201ENST00000602809 386 ntTSL 5 BASIC8.07□□□□□ -1.12
USB1Q9BQ65 AC112191.3-201ENST00000604371 277 ntBASIC8.07□□□□□ -1.12
USB1Q9BQ65 AC008875.1-201ENST00000607715 811 ntBASIC8.07□□□□□ -1.12
USB1Q9BQ65 AL132821.1-201ENST00000616029 394 ntBASIC8.07□□□□□ -1.12
USB1Q9BQ65 AL603758.1-201ENST00000618654 241 ntBASIC8.07□□□□□ -1.12
USB1Q9BQ65 AC024940.5-201ENST00000622889 474 ntBASIC8.07□□□□□ -1.12
USB1Q9BQ65 AP003400.4-201ENST00000623832 399 ntBASIC8.07□□□□□ -1.12
USB1Q9BQ65 RANBP2-205ENST00000629728 156 ntTSL 5 BASIC8.07□□□□□ -1.12
USB1Q9BQ65 AP001206.1-201ENST00000635554 720 ntBASIC8.07□□□□□ -1.12
USB1Q9BQ65 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
USB1Q9BQ65 FIGNL1-211ENST00000611938 3543 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
USB1Q9BQ65 GDF9-206ENST00000624492 1823 ntTSL 2 BASIC8.07□□□□□ -1.12
USB1Q9BQ65 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC8.07□□□□□ -1.12
USB1Q9BQ65 GGA3-202ENST00000538886 3766 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USB1Q9BQ65 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC8.07□□□□□ -1.12
USB1Q9BQ65 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
USB1Q9BQ65 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USB1Q9BQ65 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
USB1Q9BQ65 RBFOX1-223ENST00000620507 4018 ntTSL 5 BASIC8.07□□□□□ -1.12
USB1Q9BQ65 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USB1Q9BQ65 PRR15L-201ENST00000300557 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
USB1Q9BQ65 ANO2-211ENST00000546188 3702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
USB1Q9BQ65 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USB1Q9BQ65 ATP6V0A1-202ENST00000343619 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
USB1Q9BQ65 ZNF192P2-201ENST00000402215 1383 ntBASIC8.07□□□□□ -1.12
USB1Q9BQ65 HCRTR2-202ENST00000615358 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
USB1Q9BQ65 OR7A17-203ENST00000642123 3565 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
USB1Q9BQ65 PLCH1-204ENST00000460012 6413 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
USB1Q9BQ65 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USB1Q9BQ65 CTNNA2-203ENST00000402739 3684 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USB1Q9BQ65 FMO8P-201ENST00000434461 1600 ntBASIC8.07□□□□□ -1.12
USB1Q9BQ65 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USB1Q9BQ65 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
USB1Q9BQ65 AHCYL2-208ENST00000474594 2047 ntTSL 2 BASIC8.07□□□□□ -1.12
USB1Q9BQ65 SPATA31D1-201ENST00000344803 4833 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 CYP4A22-203ENST00000371891 2535 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 MYH2-204ENST00000532183 2528 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 LPAR6-202ENST00000378434 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 YIPF5-201ENST00000274496 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 SNX20-203ENST00000423026 2156 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 OR2M1P-201ENST00000318104 951 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 KIR2DL4-202ENST00000346587 1026 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
USB1Q9BQ65 RNU6-1103P-201ENST00000384150 107 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 SNORA74B-201ENST00000391100 201 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 RHBDD1-203ENST00000409053 538 ntTSL 4 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 AL139246.1-201ENST00000424657 455 ntTSL 3 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 AC121158.1-201ENST00000425645 239 ntTSL 3 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 RPL10P5-201ENST00000427719 639 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 RPL37P21-201ENST00000435890 276 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 LINC01865-202ENST00000436808 853 ntTSL 5 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 DNAJA1P6-201ENST00000437347 354 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 RPL7P11-201ENST00000437586 658 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 AC007349.2-201ENST00000439998 553 ntTSL 2 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 LINC02093-201ENST00000440522 485 ntTSL 5 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 PGBD4P3-201ENST00000440731 581 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 BRK1P2-201ENST00000442875 223 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 AC003666.1-201ENST00000454113 611 ntTSL 3 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 Z82190.1-201ENST00000454534 490 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 FP325330.1-201ENST00000457518 372 ntTSL 3 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 AC117382.1-201ENST00000468074 730 ntBASIC8.06□□□□□ -1.12
USB1Q9BQ65 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC8.06□□□□□ -1.12
USB1Q9BQ65 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms