Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.77□□□□□ -1.49
SSX3Q99909 AL391261.1-201ENST00000555712 1479 ntBASIC5.77□□□□□ -1.49
SSX3Q99909 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5.77□□□□□ -1.49
SSX3Q99909 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SSX3Q99909 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSX3Q99909 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.76□□□□□ -1.49
SSX3Q99909 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SSX3Q99909 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SSX3Q99909 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SSX3Q99909 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSX3Q99909 CAP1P2-201ENST00000417455 1409 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC5.76□□□□□ -1.49
SSX3Q99909 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SSX3Q99909 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SSX3Q99909 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SSX3Q99909 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSX3Q99909 RN7SKP55-201ENST00000364888 307 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 MIR152-201ENST00000385212 87 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 RNA5SP53-201ENST00000391299 120 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC5.76□□□□□ -1.49
SSX3Q99909 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC5.76□□□□□ -1.49
SSX3Q99909 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC5.76□□□□□ -1.49
SSX3Q99909 VDAC1P10-201ENST00000416715 891 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 GSTA6P-201ENST00000424144 582 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SSX3Q99909 AL356133.1-201ENST00000444762 372 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SSX3Q99909 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.76□□□□□ -1.49
SSX3Q99909 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC5.76□□□□□ -1.49
SSX3Q99909 ST13P21-201ENST00000453250 1098 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.76□□□□□ -1.49
SSX3Q99909 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC5.76□□□□□ -1.49
SSX3Q99909 RPS16P9-201ENST00000477220 427 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 AL079303.1-201ENST00000486611 463 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 RN7SL518P-201ENST00000491887 280 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.76□□□□□ -1.49
SSX3Q99909 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC5.76□□□□□ -1.49
SSX3Q99909 LINC01085-203ENST00000511195 326 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.76□□□□□ -1.49
SSX3Q99909 PGAM4P2-201ENST00000512491 721 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 IGHVIII-25-1-201ENST00000522143 241 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC5.76□□□□□ -1.49
SSX3Q99909 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC5.76□□□□□ -1.49
SSX3Q99909 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SSX3Q99909 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
SSX3Q99909 AC007671.1-201ENST00000616957 830 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.76□□□□□ -1.49
SSX3Q99909 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC5.76□□□□□ -1.49
SSX3Q99909 AC006453.3-201ENST00000635891 377 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 AL354702.2-202ENST00000641481 890 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 SFTPD-AS1-201ENST00000608229 5001 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSX3Q99909 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC5.76□□□□□ -1.49
SSX3Q99909 CDY7P-201ENST00000429883 1604 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
SSX3Q99909 AC004656.1-201ENST00000568479 4951 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SSX3Q99909 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.76□□□□□ -1.49
SSX3Q99909 EEF1A1P20-201ENST00000514852 1386 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC5.76□□□□□ -1.49
SSX3Q99909 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSX3Q99909 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSX3Q99909 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SSX3Q99909 HSP90AA2P-201ENST00000530115 2196 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
SSX3Q99909 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SSX3Q99909 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.76□□□□□ -1.49
SSX3Q99909 CDY5P-201ENST00000411487 1580 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 CDY9P-201ENST00000451397 1580 ntBASIC5.76□□□□□ -1.49
SSX3Q99909 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.75□□□□□ -1.49
SSX3Q99909 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SSX3Q99909 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSX3Q99909 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX3Q99909 SSXP3-201ENST00000442971 1300 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSX3Q99909 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSX3Q99909 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSX3Q99909 AC061975.5-201ENST00000584928 1441 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSX3Q99909 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSX3Q99909 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSX3Q99909 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SSX3Q99909 AC022034.1-201ENST00000512867 2156 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SSX3Q99909 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSX3Q99909 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSX3Q99909 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSX3Q99909 AL451061.1-201ENST00000407887 862 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC5.75□□□□□ -1.49
SSX3Q99909 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSX3Q99909 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX3Q99909 AC245884.2-201ENST00000426257 404 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC5.75□□□□□ -1.49
SSX3Q99909 FTLP17-201ENST00000432567 525 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 AC104698.1-201ENST00000435671 276 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.75□□□□□ -1.49
SSX3Q99909 AC009963.4-201ENST00000448535 339 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 AL133480.2-201ENST00000456723 487 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC5.75□□□□□ -1.49
SSX3Q99909 SEPT14P1-201ENST00000458703 648 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms