Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.59□□□□□ -1.2
CDK5RAP3Q96JB5 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 MAPK10-323ENST00000641493 3207 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 AC022417.1-201ENST00000624768 1303 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 RACGAP1P-201ENST00000550663 1879 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 AC107980.1-201ENST00000558671 3355 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 AC020658.2-201ENST00000559030 4020 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 RPL24P4-201ENST00000326586 421 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 OR7E25P-201ENST00000344844 931 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 RNA5SP152-201ENST00000365184 110 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 MIR138-2-201ENST00000384916 84 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 AL079341.1-201ENST00000404701 1207 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 EIF4A1P2-201ENST00000422633 1220 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 AC000089.1-201ENST00000424559 801 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 RPL3P11-201ENST00000434028 1146 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 SNRPBP1-201ENST00000443634 282 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 PFN1P11-201ENST00000445829 389 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 SLAMF6P1-201ENST00000451067 602 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 TREML3P-201ENST00000457327 501 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 AC010442.1-201ENST00000515583 816 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 AC130366.1-201ENST00000526505 1192 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 LDHC-204ENST00000536880 957 ntTSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 DIMT1P1-201ENST00000603970 763 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 AL354718.1-201ENST00000619764 589 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 AL132796.3-201ENST00000624703 900 ntBASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP3Q96JB5 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 SNORA70.3-201ENST00000365075 132 ntBASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 MIR431-201ENST00000385266 114 ntBASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 AL133480.2-201ENST00000456723 487 ntBASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 RPL7AP23-201ENST00000482625 776 ntBASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 COL6A4P2-205ENST00000509855 506 ntBASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 AC091849.1-201ENST00000509920 121 ntBASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 AC090286.3-201ENST00000573133 187 ntBASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 AC087468.1-201ENST00000604365 630 ntBASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 AC005014.3-201ENST00000605985 190 ntBASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 OR1N1-202ENST00000619659 939 ntBASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 AC022726.2-201ENST00000634673 547 ntBASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC7.57□□□□□ -1.2
CDK5RAP3Q96JB5 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms