Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
CPNE2Q96FN4 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CPNE2Q96FN4 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.71□□□□□ -1.49
CPNE2Q96FN4 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC5.71□□□□□ -1.49
CPNE2Q96FN4 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
CPNE2Q96FN4 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CPNE2Q96FN4 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CPNE2Q96FN4 AC027575.3-201ENST00000583058 2747 ntBASIC5.71□□□□□ -1.49
CPNE2Q96FN4 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.71□□□□□ -1.49
CPNE2Q96FN4 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 SNORD8-201ENST00000363915 110 ntBASIC5.71□□□□□ -1.5
CPNE2Q96FN4 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.71□□□□□ -1.5
CPNE2Q96FN4 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 AC003989.1-201ENST00000434569 565 ntBASIC5.71□□□□□ -1.5
CPNE2Q96FN4 AL590399.4-201ENST00000436561 601 ntBASIC5.71□□□□□ -1.5
CPNE2Q96FN4 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 SCDP1-201ENST00000455244 1081 ntBASIC5.71□□□□□ -1.5
CPNE2Q96FN4 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 AC091965.3-201ENST00000506236 208 ntBASIC5.71□□□□□ -1.5
CPNE2Q96FN4 AC091849.1-201ENST00000509920 121 ntBASIC5.71□□□□□ -1.5
CPNE2Q96FN4 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 AP005902.2-201ENST00000518393 307 ntBASIC5.71□□□□□ -1.5
CPNE2Q96FN4 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 AP005639.1-201ENST00000526939 192 ntBASIC5.71□□□□□ -1.5
CPNE2Q96FN4 ASB8-207ENST00000536953 923 ntTSL 2 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 FRG2IP-201ENST00000563581 781 ntBASIC5.71□□□□□ -1.5
CPNE2Q96FN4 AP006587.6-201ENST00000582128 1091 ntBASIC5.71□□□□□ -1.5
CPNE2Q96FN4 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 AL356986.1-201ENST00000604085 341 ntBASIC5.71□□□□□ -1.5
CPNE2Q96FN4 AL161931.1-201ENST00000612768 246 ntBASIC5.71□□□□□ -1.5
CPNE2Q96FN4 AC005753.1-201ENST00000623837 618 ntBASIC5.71□□□□□ -1.5
CPNE2Q96FN4 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 AL132640.3-201ENST00000630473 177 ntBASIC5.71□□□□□ -1.5
CPNE2Q96FN4 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 EEF1A1P16-201ENST00000325349 1414 ntBASIC5.71□□□□□ -1.5
CPNE2Q96FN4 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CPNE2Q96FN4 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 AC026523.2-201ENST00000625039 7739 ntBASIC5.7□□□□□ -1.5
CPNE2Q96FN4 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 OR11H13P-201ENST00000359695 979 ntBASIC5.7□□□□□ -1.5
CPNE2Q96FN4 SNORA38B-201ENST00000363524 131 ntBASIC5.7□□□□□ -1.5
CPNE2Q96FN4 RNA5SP427-201ENST00000365323 119 ntBASIC5.7□□□□□ -1.5
CPNE2Q96FN4 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 PDCL3P5-201ENST00000398028 722 ntBASIC5.7□□□□□ -1.5
CPNE2Q96FN4 MIR1231-201ENST00000408101 92 ntBASIC5.7□□□□□ -1.5
CPNE2Q96FN4 RPL23AP18-201ENST00000416139 468 ntBASIC5.7□□□□□ -1.5
CPNE2Q96FN4 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 PCMTD1P3-201ENST00000451824 472 ntBASIC5.7□□□□□ -1.5
CPNE2Q96FN4 OR7E7P-201ENST00000455678 1012 ntBASIC5.7□□□□□ -1.5
CPNE2Q96FN4 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 RPSAP24-201ENST00000461543 873 ntBASIC5.7□□□□□ -1.5
CPNE2Q96FN4 RN7SL390P-201ENST00000470634 284 ntBASIC5.7□□□□□ -1.5
CPNE2Q96FN4 AC128716.1-201ENST00000475129 166 ntBASIC5.7□□□□□ -1.5
CPNE2Q96FN4 RN7SL518P-201ENST00000491887 280 ntBASIC5.7□□□□□ -1.5
CPNE2Q96FN4 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 BUB1P1-201ENST00000603541 607 ntBASIC5.7□□□□□ -1.5
CPNE2Q96FN4 AC005277.2-201ENST00000617898 390 ntBASIC5.7□□□□□ -1.5
CPNE2Q96FN4 MRPL57P3-201ENST00000619218 176 ntBASIC5.7□□□□□ -1.5
CPNE2Q96FN4 AC021422.1-201ENST00000621212 473 ntBASIC5.7□□□□□ -1.5
CPNE2Q96FN4 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.7□□□□□ -1.5
CPNE2Q96FN4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 AP000432.2-201ENST00000624164 2048 ntBASIC5.7□□□□□ -1.5
CPNE2Q96FN4 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CPNE2Q96FN4 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms