Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 CNN3P1-201ENST00000401596 935 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 LYPLA1P3-201ENST00000402650 695 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 GSTA8P-201ENST00000404253 637 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AL049697.3-201ENST00000406493 982 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 Z68694.1-201ENST00000413929 841 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 RAB9AP4-201ENST00000415230 609 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC090018.1-201ENST00000434369 367 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 MTND2P20-201ENST00000440805 661 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 OR7E62P-201ENST00000456741 477 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 RPS2P25-201ENST00000467247 580 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC040975.1-201ENST00000472104 316 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC008410.1-201ENST00000483777 339 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC091860.1-201ENST00000505723 432 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 OR7E83P-201ENST00000511021 970 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AP003461.1-201ENST00000528866 78 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 BMS1P15-201ENST00000554269 1141 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AL391156.1-201ENST00000554965 554 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC090286.3-201ENST00000573133 187 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC097381.3-201ENST00000608962 462 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 BX005195.1-201ENST00000618097 1198 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AL603755.1-201ENST00000619504 163 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC022743.1-201ENST00000624990 664 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 EEF1A1P26-201ENST00000458319 1363 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC025263.3-201ENST00000622965 1396 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 AC125603.4-201ENST00000621942 2699 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 VEZF1P1-201ENST00000423931 1541 ntBASIC6.91□□□□□ -1.3
NUP43Q8NFH3 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
NUP43Q8NFH3 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms