Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 AL389925.1-201ENST00000432257 728 ntBASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 AC245452.2-201ENST00000435222 392 ntBASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 MROH3P-201ENST00000435735 2676 ntBASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 RPL12P11-201ENST00000439970 501 ntBASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 CXCR2P1-202ENST00000443392 1074 ntBASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 AC008055.1-201ENST00000547032 609 ntBASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 AL391262.1-201ENST00000556558 1992 ntBASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 AC106785.4-201ENST00000569492 412 ntBASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 RN7SL366P-201ENST00000577957 292 ntBASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 AC091167.5-201ENST00000605689 894 ntBASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 AC015982.1-201ENST00000608113 465 ntBASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
SHROOM1Q2M3G4 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
SHROOM1Q2M3G4 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
SHROOM1Q2M3G4 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
SHROOM1Q2M3G4 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 RNA5SP433-201ENST00000364491 114 ntBASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 RNA5SP122-201ENST00000384457 108 ntBASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 AC092865.3-201ENST00000425390 1026 ntBASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 MED28P4-201ENST00000433137 572 ntBASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 DNAJA1P5-201ENST00000440278 943 ntBASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 RN7SKP35-201ENST00000517210 151 ntBASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 RN7SL208P-201ENST00000577964 296 ntBASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 AL357140.4-201ENST00000636827 412 ntBASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 AC020658.2-201ENST00000559030 4020 ntBASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 MTCO1P25-201ENST00000414449 1799 ntBASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 AF131215.2-201ENST00000531549 1710 ntBASIC7.64□□□□□ -1.19
SHROOM1Q2M3G4 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 AC018717.1-201ENST00000457712 1505 ntBASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 NEK2P4-201ENST00000425793 1329 ntBASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 AL512310.3-201ENST00000547023 1335 ntBASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 RNA5SP110-201ENST00000362638 115 ntBASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 AL354707.3-201ENST00000427308 331 ntBASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 AC106800.2-201ENST00000514009 1103 ntBASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms