Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CL1P78423 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CL1P78423 RNA5SP302-201ENST00000364896 100 ntBASIC5.47□□□□□ -1.53
CX3CL1P78423 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CL1P78423 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CX3CL1P78423 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CL1P78423 AL139135.1-201ENST00000412675 209 ntBASIC5.47□□□□□ -1.53
CX3CL1P78423 AC007064.3-201ENST00000422608 359 ntBASIC5.47□□□□□ -1.53
CX3CL1P78423 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC5.47□□□□□ -1.53
CX3CL1P78423 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
CX3CL1P78423 RPS7P4-201ENST00000444127 582 ntBASIC5.47□□□□□ -1.53
CX3CL1P78423 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC5.47□□□□□ -1.53
CX3CL1P78423 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC5.47□□□□□ -1.53
CX3CL1P78423 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC5.47□□□□□ -1.53
CX3CL1P78423 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.47□□□□□ -1.53
CX3CL1P78423 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.47□□□□□ -1.53
CX3CL1P78423 RPS26P11-201ENST00000463445 348 ntBASIC5.47□□□□□ -1.53
CX3CL1P78423 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC5.47□□□□□ -1.53
CX3CL1P78423 RPS26P6-201ENST00000475156 348 ntBASIC5.47□□□□□ -1.53
CX3CL1P78423 RPL10P7-201ENST00000495649 625 ntBASIC5.47□□□□□ -1.53
CX3CL1P78423 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.47□□□□□ -1.53
CX3CL1P78423 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.47□□□□□ -1.53
CX3CL1P78423 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.47□□□□□ -1.53
CX3CL1P78423 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC5.47□□□□□ -1.53
CX3CL1P78423 RNA5SP75-201ENST00000516841 111 ntBASIC5.47□□□□□ -1.53
CX3CL1P78423 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.47□□□□□ -1.53
CX3CL1P78423 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC5.47□□□□□ -1.53
CX3CL1P78423 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC5.47□□□□□ -1.53
CX3CL1P78423 AL135978.1-201ENST00000553618 1266 ntBASIC5.47□□□□□ -1.53
CX3CL1P78423 FXNP1-201ENST00000555153 337 ntBASIC5.47□□□□□ -1.53
CX3CL1P78423 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.47□□□□□ -1.53
CX3CL1P78423 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
CX3CL1P78423 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC5.47□□□□□ -1.53
CX3CL1P78423 WDR45BP1-201ENST00000583470 1029 ntBASIC5.47□□□□□ -1.53
CX3CL1P78423 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC5.47□□□□□ -1.53
CX3CL1P78423 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC5.47□□□□□ -1.53
CX3CL1P78423 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC5.47□□□□□ -1.53
CX3CL1P78423 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC5.47□□□□□ -1.53
CX3CL1P78423 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.47□□□□□ -1.53
CX3CL1P78423 AL354702.2-202ENST00000641481 890 ntBASIC5.47□□□□□ -1.53
CX3CL1P78423 CA10-204ENST00000570565 2276 ntTSL 5 BASIC5.47□□□□□ -1.53
CX3CL1P78423 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CL1P78423 AC105114.1-201ENST00000624795 1862 ntBASIC5.47□□□□□ -1.53
CX3CL1P78423 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CL1P78423 AC083806.2-201ENST00000617795 2685 ntBASIC5.47□□□□□ -1.53
CX3CL1P78423 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CL1P78423 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CL1P78423 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CL1P78423 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CL1P78423 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CL1P78423 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CL1P78423 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.47□□□□□ -1.53
CX3CL1P78423 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC5.47□□□□□ -1.53
CX3CL1P78423 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CL1P78423 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
CX3CL1P78423 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CX3CL1P78423 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CX3CL1P78423 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CX3CL1P78423 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CX3CL1P78423 TATDN2P3-201ENST00000452855 3665 ntBASIC5.46□□□□□ -1.53
CX3CL1P78423 DLEU2L-201ENST00000371086 3555 ntBASIC5.46□□□□□ -1.53
CX3CL1P78423 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.46□□□□□ -1.53
CX3CL1P78423 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.53
CX3CL1P78423 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CX3CL1P78423 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
CX3CL1P78423 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.46□□□□□ -1.53
CX3CL1P78423 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CX3CL1P78423 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CX3CL1P78423 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC5.46□□□□□ -1.54
CX3CL1P78423 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CX3CL1P78423 AP005139.1-201ENST00000580702 1647 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CX3CL1P78423 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CX3CL1P78423 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CX3CL1P78423 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CX3CL1P78423 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CX3CL1P78423 RNU6-670P-201ENST00000364312 104 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CX3CL1P78423 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CX3CL1P78423 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CX3CL1P78423 RNA5SP35-201ENST00000391257 129 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.46□□□□□ -1.54
CX3CL1P78423 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.46□□□□□ -1.54
CX3CL1P78423 RPSAP60-201ENST00000415403 880 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.46□□□□□ -1.54
CX3CL1P78423 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CX3CL1P78423 AC096644.3-201ENST00000416788 338 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 PPIAP23-201ENST00000420099 497 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 KIF4CP-201ENST00000422742 1279 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 MTND1P10-201ENST00000426108 832 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 PUDPP2-201ENST00000431423 643 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.46□□□□□ -1.54
CX3CL1P78423 AL592114.2-201ENST00000440142 532 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 AL158214.1-201ENST00000444423 404 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 AC017099.1-201ENST00000448261 1028 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 AL500527.1-201ENST00000448532 255 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.46□□□□□ -1.54
CX3CL1P78423 GOT2P2-201ENST00000450663 1251 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 ST13P21-201ENST00000453250 1098 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms