Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC4.67□□□□□ -1.66
CKS1BP61024 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC4.67□□□□□ -1.66
CKS1BP61024 LINC01821-202ENST00000438505 882 ntTSL 4 BASIC4.67□□□□□ -1.66
CKS1BP61024 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC4.67□□□□□ -1.66
CKS1BP61024 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.67□□□□□ -1.66
CKS1BP61024 GAPDHP14-201ENST00000450472 937 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC4.67□□□□□ -1.66
CKS1BP61024 RN7SL621P-201ENST00000472565 299 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 AC023794.3-204ENST00000510754 236 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC4.67□□□□□ -1.66
CKS1BP61024 AC009630.2-201ENST00000524133 570 ntTSL 5 BASIC4.67□□□□□ -1.66
CKS1BP61024 AP000859.1-201ENST00000525536 307 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC4.67□□□□□ -1.66
CKS1BP61024 OR4A21P-201ENST00000532759 944 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 AC068631.3-201ENST00000538831 225 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 AC068993.1-201ENST00000546724 589 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.67□□□□□ -1.66
CKS1BP61024 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CKS1BP61024 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC4.67□□□□□ -1.66
CKS1BP61024 RN7SL199P-201ENST00000578752 281 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 RN7SL656P-201ENST00000579044 281 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 MIR5192-201ENST00000579892 92 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 RN7SL155P-201ENST00000581538 263 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 RN7SL404P-201ENST00000582421 281 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CKS1BP61024 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CKS1BP61024 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
CKS1BP61024 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC4.67□□□□□ -1.66
CKS1BP61024 AC108451.2-201ENST00000603875 538 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
CKS1BP61024 RNU6-84P-201ENST00000607737 102 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.67□□□□□ -1.66
CKS1BP61024 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.67□□□□□ -1.66
CKS1BP61024 MIR6751-201ENST00000610479 63 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 AL137246.2-201ENST00000613439 662 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC4.67□□□□□ -1.66
CKS1BP61024 HOTTIP_2.1-201ENST00000616633 376 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC4.67□□□□□ -1.66
CKS1BP61024 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CKS1BP61024 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CKS1BP61024 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CKS1BP61024 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CKS1BP61024 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
CKS1BP61024 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CKS1BP61024 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.67□□□□□ -1.66
CKS1BP61024 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CKS1BP61024 AC013488.1-201ENST00000526618 1838 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CKS1BP61024 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.66□□□□□ -1.66
CKS1BP61024 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC4.66□□□□□ -1.66
CKS1BP61024 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CKS1BP61024 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CKS1BP61024 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC4.66□□□□□ -1.66
CKS1BP61024 SOCS5P3-201ENST00000425115 1576 ntBASIC4.66□□□□□ -1.66
CKS1BP61024 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CKS1BP61024 FOLH1B-202ENST00000529567 2145 ntBASIC4.66□□□□□ -1.66
CKS1BP61024 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CKS1BP61024 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CKS1BP61024 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CKS1BP61024 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CKS1BP61024 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CKS1BP61024 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CKS1BP61024 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CKS1BP61024 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC4.66□□□□□ -1.66
CKS1BP61024 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CKS1BP61024 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CKS1BP61024 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CKS1BP61024 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC4.66□□□□□ -1.66
CKS1BP61024 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CKS1BP61024 RN7SKP254-201ENST00000410685 310 ntBASIC4.66□□□□□ -1.66
CKS1BP61024 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CKS1BP61024 AC002367.1-201ENST00000416765 405 ntBASIC4.66□□□□□ -1.66
CKS1BP61024 OR6C64P-201ENST00000419708 825 ntBASIC4.66□□□□□ -1.66
CKS1BP61024 AC000362.1-201ENST00000433725 425 ntBASIC4.66□□□□□ -1.66
CKS1BP61024 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC4.66□□□□□ -1.66
CKS1BP61024 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC4.66□□□□□ -1.66
CKS1BP61024 ARMC8P1-201ENST00000443069 1289 ntBASIC4.66□□□□□ -1.66
CKS1BP61024 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CKS1BP61024 AL591379.2-201ENST00000450223 397 ntBASIC4.66□□□□□ -1.66
CKS1BP61024 AC013429.1-201ENST00000456604 422 ntBASIC4.66□□□□□ -1.66
CKS1BP61024 AC018892.2-201ENST00000457656 693 ntBASIC4.66□□□□□ -1.66
CKS1BP61024 RPS4XP19-201ENST00000460237 736 ntBASIC4.66□□□□□ -1.66
CKS1BP61024 RPS4XP12-201ENST00000461747 709 ntBASIC4.66□□□□□ -1.66
CKS1BP61024 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC4.66□□□□□ -1.66
CKS1BP61024 RN7SL392P-201ENST00000473024 299 ntBASIC4.66□□□□□ -1.66
CKS1BP61024 AL035690.1-201ENST00000490892 383 ntBASIC4.66□□□□□ -1.66
CKS1BP61024 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC4.66□□□□□ -1.66
CKS1BP61024 RN7SL516P-201ENST00000496127 297 ntBASIC4.66□□□□□ -1.66
CKS1BP61024 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CKS1BP61024 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC4.66□□□□□ -1.66
CKS1BP61024 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC4.66□□□□□ -1.66
CKS1BP61024 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC4.66□□□□□ -1.66
CKS1BP61024 IGKV2OR22-4-201ENST00000523309 367 ntBASIC4.66□□□□□ -1.66
CKS1BP61024 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.66□□□□□ -1.66
CKS1BP61024 AP003499.1-201ENST00000527217 574 ntBASIC4.66□□□□□ -1.66
CKS1BP61024 AP006587.2-201ENST00000530696 493 ntBASIC4.66□□□□□ -1.66
CKS1BP61024 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC4.66□□□□□ -1.66
CKS1BP61024 AC079866.1-201ENST00000534985 1220 ntBASIC4.66□□□□□ -1.66
CKS1BP61024 AC133569.1-201ENST00000564327 373 ntBASIC4.66□□□□□ -1.66
CKS1BP61024 EEF1B2P1-201ENST00000567221 672 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms