Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 PDCL3P5-201ENST00000398028 722 ntBASIC6.11□□□□□ -1.43
NCK1P16333 RN7SKP137-201ENST00000411074 307 ntBASIC6.11□□□□□ -1.43
NCK1P16333 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC6.11□□□□□ -1.43
NCK1P16333 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.11□□□□□ -1.43
NCK1P16333 SPATA20P1-201ENST00000423089 438 ntBASIC6.11□□□□□ -1.43
NCK1P16333 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NCK1P16333 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
NCK1P16333 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NCK1P16333 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.11□□□□□ -1.43
NCK1P16333 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.11□□□□□ -1.43
NCK1P16333 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.11□□□□□ -1.43
NCK1P16333 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
NCK1P16333 RN7SL223P-201ENST00000470401 294 ntBASIC6.11□□□□□ -1.43
NCK1P16333 TUBBP11-201ENST00000472255 252 ntBASIC6.11□□□□□ -1.43
NCK1P16333 RN7SL314P-201ENST00000490735 292 ntBASIC6.11□□□□□ -1.43
NCK1P16333 RN7SL445P-201ENST00000495609 293 ntBASIC6.11□□□□□ -1.43
NCK1P16333 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.11□□□□□ -1.43
NCK1P16333 OR52H2P-201ENST00000514607 902 ntBASIC6.11□□□□□ -1.43
NCK1P16333 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.11□□□□□ -1.43
NCK1P16333 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.11□□□□□ -1.43
NCK1P16333 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.11□□□□□ -1.43
NCK1P16333 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NCK1P16333 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.11□□□□□ -1.43
NCK1P16333 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.11□□□□□ -1.43
NCK1P16333 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.11□□□□□ -1.43
NCK1P16333 AC007494.1-201ENST00000562293 760 ntBASIC6.11□□□□□ -1.43
NCK1P16333 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.11□□□□□ -1.43
NCK1P16333 AC116165.3-201ENST00000614524 400 ntBASIC6.11□□□□□ -1.43
NCK1P16333 pRNA.9-201ENST00000618609 89 ntBASIC6.11□□□□□ -1.43
NCK1P16333 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NCK1P16333 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.11□□□□□ -1.43
NCK1P16333 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
NCK1P16333 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NCK1P16333 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NCK1P16333 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NCK1P16333 CUBNP3-201ENST00000457461 1784 ntBASIC6.11□□□□□ -1.43
NCK1P16333 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NCK1P16333 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.1□□□□□ -1.43
NCK1P16333 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NCK1P16333 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NCK1P16333 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.1□□□□□ -1.43
NCK1P16333 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NCK1P16333 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NCK1P16333 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
NCK1P16333 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
NCK1P16333 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
NCK1P16333 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.1□□□□□ -1.43
NCK1P16333 AL512353.3-201ENST00000417517 1326 ntBASIC6.1□□□□□ -1.43
NCK1P16333 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NCK1P16333 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
NCK1P16333 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NCK1P16333 FUNDC2P3-201ENST00000334716 533 ntBASIC6.1□□□□□ -1.43
NCK1P16333 SNORA38B-201ENST00000363524 131 ntBASIC6.1□□□□□ -1.43
NCK1P16333 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NCK1P16333 U3.43-201ENST00000410734 213 ntBASIC6.1□□□□□ -1.43
NCK1P16333 RN7SKP268-201ENST00000411107 316 ntBASIC6.1□□□□□ -1.43
NCK1P16333 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.1□□□□□ -1.43
NCK1P16333 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.1□□□□□ -1.43
NCK1P16333 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.1□□□□□ -1.43
NCK1P16333 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.1□□□□□ -1.43
NCK1P16333 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.1□□□□□ -1.43
NCK1P16333 RPL26P30-201ENST00000453533 435 ntBASIC6.1□□□□□ -1.43
NCK1P16333 SNX18P26-201ENST00000458433 740 ntBASIC6.1□□□□□ -1.43
NCK1P16333 AC115223.1-201ENST00000466377 870 ntBASIC6.1□□□□□ -1.43
NCK1P16333 TECRP2-201ENST00000503270 928 ntBASIC6.1□□□□□ -1.43
NCK1P16333 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.1□□□□□ -1.43
NCK1P16333 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.1□□□□□ -1.43
NCK1P16333 AC107952.1-201ENST00000524200 376 ntBASIC6.1□□□□□ -1.43
NCK1P16333 OR4A40P-201ENST00000533878 948 ntBASIC6.1□□□□□ -1.43
NCK1P16333 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC6.1□□□□□ -1.43
NCK1P16333 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.1□□□□□ -1.43
NCK1P16333 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NCK1P16333 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.1□□□□□ -1.43
NCK1P16333 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.1□□□□□ -1.43
NCK1P16333 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.1□□□□□ -1.43
NCK1P16333 OR4H6P-201ENST00000563771 921 ntBASIC6.1□□□□□ -1.43
NCK1P16333 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.1□□□□□ -1.43
NCK1P16333 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.1□□□□□ -1.43
NCK1P16333 PRR13P3-201ENST00000603578 376 ntBASIC6.1□□□□□ -1.43
NCK1P16333 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.1□□□□□ -1.43
NCK1P16333 AC135068.11-201ENST00000636378 921 ntBASIC6.1□□□□□ -1.43
NCK1P16333 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NCK1P16333 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.1□□□□□ -1.43
NCK1P16333 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NCK1P16333 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NCK1P16333 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NCK1P16333 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.09□□□□□ -1.43
NCK1P16333 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.09□□□□□ -1.43
NCK1P16333 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
NCK1P16333 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
NCK1P16333 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NCK1P16333 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NCK1P16333 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
NCK1P16333 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
NCK1P16333 AL138847.1-201ENST00000258651 546 ntBASIC6.09□□□□□ -1.43
NCK1P16333 RNU12-2P-201ENST00000364789 156 ntBASIC6.09□□□□□ -1.43
NCK1P16333 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NCK1P16333 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
NCK1P16333 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.09□□□□□ -1.43
NCK1P16333 MRPS21P5-201ENST00000417885 231 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms