Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HMGB1P09429 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HMGB1P09429 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HMGB1P09429 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC8.25□□□□□ -1.09
HMGB1P09429 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HMGB1P09429 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HMGB1P09429 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HMGB1P09429 RPL9P21-201ENST00000392269 505 ntBASIC8.25□□□□□ -1.09
HMGB1P09429 AL136116.2-201ENST00000404020 785 ntBASIC8.25□□□□□ -1.09
HMGB1P09429 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC8.25□□□□□ -1.09
HMGB1P09429 RPL12P10-201ENST00000413498 498 ntBASIC8.25□□□□□ -1.09
HMGB1P09429 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HMGB1P09429 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC8.25□□□□□ -1.09
HMGB1P09429 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC8.25□□□□□ -1.09
HMGB1P09429 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HMGB1P09429 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HMGB1P09429 LAPTM4BP1-201ENST00000447781 690 ntBASIC8.25□□□□□ -1.09
HMGB1P09429 VN1R48P-201ENST00000448149 1036 ntBASIC8.25□□□□□ -1.09
HMGB1P09429 AP002345.1-201ENST00000456493 928 ntBASIC8.25□□□□□ -1.09
HMGB1P09429 RPL5P15-201ENST00000475870 897 ntBASIC8.25□□□□□ -1.09
HMGB1P09429 RN7SL259P-201ENST00000478499 253 ntBASIC8.25□□□□□ -1.09
HMGB1P09429 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC8.25□□□□□ -1.09
HMGB1P09429 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC8.25□□□□□ -1.09
HMGB1P09429 SUMO2P7-201ENST00000511179 285 ntBASIC8.25□□□□□ -1.09
HMGB1P09429 LECT2-203ENST00000512872 762 ntTSL 5 BASIC8.25□□□□□ -1.09
HMGB1P09429 RNU6-491P-201ENST00000516099 110 ntBASIC8.25□□□□□ -1.09
HMGB1P09429 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC8.25□□□□□ -1.09
HMGB1P09429 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
HMGB1P09429 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC8.25□□□□□ -1.09
HMGB1P09429 AL591767.3-201ENST00000554632 525 ntBASIC8.25□□□□□ -1.09
HMGB1P09429 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC8.25□□□□□ -1.09
HMGB1P09429 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC8.25□□□□□ -1.09
HMGB1P09429 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC8.25□□□□□ -1.09
HMGB1P09429 AC005229.3-201ENST00000603438 323 ntBASIC8.25□□□□□ -1.09
HMGB1P09429 AL161931.1-201ENST00000612768 246 ntBASIC8.25□□□□□ -1.09
HMGB1P09429 AC019080.5-201ENST00000624891 757 ntBASIC8.25□□□□□ -1.09
HMGB1P09429 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC8.25□□□□□ -1.09
HMGB1P09429 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC8.25□□□□□ -1.09
HMGB1P09429 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC8.25□□□□□ -1.09
HMGB1P09429 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
HMGB1P09429 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC8.25□□□□□ -1.09
HMGB1P09429 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HMGB1P09429 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
HMGB1P09429 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HMGB1P09429 AC005839.1-201ENST00000624148 3213 ntBASIC8.25□□□□□ -1.09
HMGB1P09429 NXF4-202ENST00000416098 1465 ntBASIC8.25□□□□□ -1.09
HMGB1P09429 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HMGB1P09429 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
HMGB1P09429 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HMGB1P09429 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC8.25□□□□□ -1.09
HMGB1P09429 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
HMGB1P09429 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
HMGB1P09429 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC8.24□□□□□ -1.09
HMGB1P09429 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC8.24□□□□□ -1.09
HMGB1P09429 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HMGB1P09429 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC8.24□□□□□ -1.09
HMGB1P09429 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC8.24□□□□□ -1.09
HMGB1P09429 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
HMGB1P09429 FUNDC2P3-201ENST00000334716 533 ntBASIC8.24□□□□□ -1.09
HMGB1P09429 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HMGB1P09429 OR11H13P-201ENST00000359695 979 ntBASIC8.24□□□□□ -1.09
HMGB1P09429 RN7SKP47-201ENST00000365347 328 ntBASIC8.24□□□□□ -1.09
HMGB1P09429 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC8.24□□□□□ -1.09
HMGB1P09429 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC8.24□□□□□ -1.09
HMGB1P09429 MIR640-201ENST00000385086 96 ntBASIC8.24□□□□□ -1.09
HMGB1P09429 GSTA12P-201ENST00000402398 508 ntBASIC8.24□□□□□ -1.09
HMGB1P09429 MTND3P20-201ENST00000407663 186 ntBASIC8.24□□□□□ -1.09
HMGB1P09429 AC002524.1-201ENST00000411687 547 ntBASIC8.24□□□□□ -1.09
HMGB1P09429 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC8.24□□□□□ -1.09
HMGB1P09429 GAPDHP69-201ENST00000425504 1008 ntBASIC8.24□□□□□ -1.09
HMGB1P09429 SCAND3P1-201ENST00000439854 1060 ntBASIC8.24□□□□□ -1.09
HMGB1P09429 AC010878.1-201ENST00000456500 1047 ntBASIC8.24□□□□□ -1.09
HMGB1P09429 RN7SL563P-201ENST00000481233 298 ntBASIC8.24□□□□□ -1.09
HMGB1P09429 LNX1-AS2-202ENST00000509974 628 ntTSL 2 BASIC8.24□□□□□ -1.09
HMGB1P09429 DCAF13P2-201ENST00000514188 555 ntBASIC8.24□□□□□ -1.09
HMGB1P09429 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC8.24□□□□□ -1.09
HMGB1P09429 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC8.24□□□□□ -1.09
HMGB1P09429 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC8.24□□□□□ -1.09
HMGB1P09429 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC8.24□□□□□ -1.09
HMGB1P09429 OR4A6P-201ENST00000534364 970 ntBASIC8.24□□□□□ -1.09
HMGB1P09429 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC8.24□□□□□ -1.09
HMGB1P09429 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC8.24□□□□□ -1.09
HMGB1P09429 AC020765.1-201ENST00000604296 328 ntBASIC8.24□□□□□ -1.09
HMGB1P09429 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC8.24□□□□□ -1.09
HMGB1P09429 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC8.24□□□□□ -1.09
HMGB1P09429 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC8.24□□□□□ -1.09
HMGB1P09429 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC8.24□□□□□ -1.09
HMGB1P09429 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
HMGB1P09429 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HMGB1P09429 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HMGB1P09429 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
HMGB1P09429 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC8.24□□□□□ -1.09
HMGB1P09429 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HMGB1P09429 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
HMGB1P09429 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC8.24□□□□□ -1.09
HMGB1P09429 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
HMGB1P09429 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HMGB1P09429 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HMGB1P09429 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HMGB1P09429 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms