Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.05□□□□□ -1.44
SPTA1P02549 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SPTA1P02549 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SPTA1P02549 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SPTA1P02549 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SPTA1P02549 AL662795.2-201ENST00000624252 3706 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.05□□□□□ -1.44
SPTA1P02549 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SPTA1P02549 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.05□□□□□ -1.44
SPTA1P02549 AL391361.1-201ENST00000405580 489 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.05□□□□□ -1.44
SPTA1P02549 RPL23AP27-201ENST00000415161 451 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 MTND2P12-201ENST00000417560 1252 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 GTF3AP6-201ENST00000432585 986 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.05□□□□□ -1.44
SPTA1P02549 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
SPTA1P02549 RPL7AP23-201ENST00000482625 776 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 AC108103.1-201ENST00000511286 446 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.05□□□□□ -1.44
SPTA1P02549 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.05□□□□□ -1.44
SPTA1P02549 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.05□□□□□ -1.44
SPTA1P02549 AC100767.2-201ENST00000604840 693 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 AC091167.5-201ENST00000605689 894 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 AC126175.1-201ENST00000617041 758 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 MIR6810-201ENST00000622701 70 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC6.05□□□□□ -1.44
SPTA1P02549 AC138627.1-203ENST00000641872 1680 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SPTA1P02549 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SPTA1P02549 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.05□□□□□ -1.44
SPTA1P02549 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.05□□□□□ -1.44
SPTA1P02549 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC6.05□□□□□ -1.44
SPTA1P02549 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC6.05□□□□□ -1.44
SPTA1P02549 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC6.05□□□□□ -1.44
SPTA1P02549 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SPTA1P02549 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC6.05□□□□□ -1.44
SPTA1P02549 AC129502.1-201ENST00000623261 1654 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.05□□□□□ -1.44
SPTA1P02549 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SPTA1P02549 TMSB4XP4-201ENST00000323496 618 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 SUGT1P2-201ENST00000379452 992 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.05□□□□□ -1.44
SPTA1P02549 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.05□□□□□ -1.44
SPTA1P02549 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.05□□□□□ -1.44
SPTA1P02549 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.05□□□□□ -1.44
SPTA1P02549 PAICSP2-201ENST00000429118 1150 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 AC097463.1-201ENST00000447288 481 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 RPL23AP28-201ENST00000448062 470 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.05□□□□□ -1.44
SPTA1P02549 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.05□□□□□ -1.44
SPTA1P02549 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SPTA1P02549 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.05□□□□□ -1.44
SPTA1P02549 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.05□□□□□ -1.44
SPTA1P02549 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.05□□□□□ -1.44
SPTA1P02549 MIR4701-201ENST00000583094 63 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SPTA1P02549 AL049541.2-201ENST00000626377 555 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 THAP12P6-201ENST00000431978 2310 ntBASIC6.05□□□□□ -1.44
SPTA1P02549 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
SPTA1P02549 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
SPTA1P02549 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SPTA1P02549 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SPTA1P02549 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.04□□□□□ -1.44
SPTA1P02549 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.04□□□□□ -1.44
SPTA1P02549 CDY10P-201ENST00000452415 1567 ntBASIC6.04□□□□□ -1.44
SPTA1P02549 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.04□□□□□ -1.44
SPTA1P02549 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SPTA1P02549 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SPTA1P02549 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.04□□□□□ -1.44
SPTA1P02549 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.04□□□□□ -1.44
SPTA1P02549 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.04□□□□□ -1.44
SPTA1P02549 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SPTA1P02549 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC6.04□□□□□ -1.44
SPTA1P02549 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.04□□□□□ -1.44
SPTA1P02549 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SPTA1P02549 AC133552.4-201ENST00000576103 676 ntBASIC6.04□□□□□ -1.44
SPTA1P02549 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.04□□□□□ -1.44
SPTA1P02549 RNA5SP440-201ENST00000612665 119 ntBASIC6.04□□□□□ -1.44
SPTA1P02549 AF117829.2-201ENST00000619538 361 ntBASIC6.04□□□□□ -1.44
SPTA1P02549 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.04□□□□□ -1.44
SPTA1P02549 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.04□□□□□ -1.44
SPTA1P02549 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SPTA1P02549 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SPTA1P02549 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.04□□□□□ -1.44
SPTA1P02549 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SPTA1P02549 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SPTA1P02549 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SPTA1P02549 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SPTA1P02549 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SPTA1P02549 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SPTA1P02549 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC6.04□□□□□ -1.44
SPTA1P02549 AL139805.1-201ENST00000407837 289 ntBASIC6.04□□□□□ -1.44
SPTA1P02549 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SPTA1P02549 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.04□□□□□ -1.44
SPTA1P02549 TUBB4BP6-201ENST00000437576 479 ntBASIC6.04□□□□□ -1.44
SPTA1P02549 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC6.04□□□□□ -1.44
SPTA1P02549 GM2AP2-201ENST00000491764 562 ntBASIC6.04□□□□□ -1.44
SPTA1P02549 OR7E99P-201ENST00000505750 922 ntBASIC6.04□□□□□ -1.44
SPTA1P02549 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.04□□□□□ -1.44
SPTA1P02549 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms