Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 EEF1A1P20-201ENST00000514852 1386 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 RN7SKP186-201ENST00000365371 303 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC113608.1-201ENST00000398740 305 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 OR7E91P-201ENST00000400027 866 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AL096800.1-201ENST00000405326 893 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC017104.2-201ENST00000417000 321 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC009506.2-201ENST00000420635 840 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC092651.1-201ENST00000426110 312 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC239367.3-201ENST00000428996 814 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC009299.1-201ENST00000429684 717 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 KATNBL1P2-201ENST00000433311 835 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 FDPSP8-201ENST00000438304 1089 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC079781.1-201ENST00000441505 394 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC103563.5-201ENST00000455643 364 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 Z83838.1-202ENST00000456225 839 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 BX323845.2-201ENST00000458382 234 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 RN7SL91P-201ENST00000469313 291 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 PDPN-205ENST00000487038 607 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 RN7SL445P-201ENST00000495609 293 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 RN7SL516P-201ENST00000496127 297 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC090539.2-201ENST00000523425 671 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 OR4A40P-201ENST00000533878 948 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 BOLA2P1-201ENST00000584794 232 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 OR5AH1P-201ENST00000595968 283 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AL023806.2-201ENST00000603042 263 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC108451.2-201ENST00000603875 538 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC007262.1-201ENST00000604099 321 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC069234.4-201ENST00000621276 412 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC093671.1-201ENST00000624981 2929 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC020656.2-201ENST00000613291 5309 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AL136298.2-201ENST00000556497 1570 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 AC130456.1-201ENST00000565085 1363 ntBASIC4.91□□□□□ -1.62
HLA-DQA1P01909 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DQA1P01909 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-DQA1P01909 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.9□□□□□ -1.62
HLA-DQA1P01909 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-DQA1P01909 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.9□□□□□ -1.62
HLA-DQA1P01909 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
HLA-DQA1P01909 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
HLA-DQA1P01909 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC4.9□□□□□ -1.62
HLA-DQA1P01909 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-DQA1P01909 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-DQA1P01909 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-DQA1P01909 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.9□□□□□ -1.62
HLA-DQA1P01909 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 MIR133A2-201ENST00000347538 102 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 RNA5SP260-201ENST00000363849 111 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 RNU6-316P-201ENST00000391027 107 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 RNU2-5P-201ENST00000410533 180 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 TRGV5P-201ENST00000419915 354 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 AL627308.2-201ENST00000420014 432 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 SNX18P9-201ENST00000440580 835 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 GAPDHP20-201ENST00000444107 1007 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 AC010878.1-201ENST00000456500 1047 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 OR7E62P-201ENST00000456741 477 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 AC083806.1-201ENST00000468934 316 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 RN7SL228P-201ENST00000470060 303 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 RN7SL306P-201ENST00000492941 296 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 AC008040.4-201ENST00000494834 768 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 IGLVV-66-201ENST00000523818 341 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms