Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 OR1N1-202ENST00000619659 939 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AC027506.1-201ENST00000621395 198 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AC004836.1-201ENST00000623032 634 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AC117503.3-201ENST00000623811 601 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 TRIM53CP-201ENST00000531490 1354 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 AC006511.3-201ENST00000624929 1783 ntBASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 RNA5SP429-201ENST00000363688 109 ntBASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 RNA5SP474-201ENST00000391234 90 ntBASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 AL451061.1-201ENST00000407887 862 ntBASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 AL139100.1-201ENST00000408001 498 ntBASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 AC239367.3-201ENST00000428996 814 ntBASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 RPS10P21-201ENST00000430654 475 ntBASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 AC023310.2-201ENST00000553844 547 ntBASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 MIR378C-201ENST00000578683 81 ntBASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 AL512430.4-201ENST00000603085 613 ntBASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 AL590032.1-201ENST00000604920 252 ntBASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DRB4X5D2U9 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 MAPK10-261ENST00000641050 3109 ntBASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 ZNF806-201ENST00000438300 1774 ntBASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 HSPD1P1-201ENST00000503199 1726 ntBASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 SNORA70.3-201ENST00000365075 132 ntBASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 LDHAP5-201ENST00000394996 622 ntBASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 AL590128.1-201ENST00000433407 286 ntBASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 AL356133.1-201ENST00000444762 372 ntBASIC5.01□□□□□ -1.61
HLA-DRB4X5D2U9 RPL7AP71-201ENST00000451120 739 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms