Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ANP32BP1-201ENST00000564205 1297 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 CYP1A1-205ENST00000564596 988 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 UBE2FP2-201ENST00000566646 462 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 RN7SL619P-201ENST00000581753 258 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AC007998.3-202ENST00000591141 697 ntTSL 3 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AL365503.1-201ENST00000605247 905 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AL592494.3-201ENST00000609485 464 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AC097505.1-201ENST00000610199 565 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 FAM30B-201ENST00000611556 397 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AC025594.3-201ENST00000613068 790 ntBASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AL022318.4-202ENST00000622217 591 ntTSL 5 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CUEDC1Q9NWM3 NLRP5-201ENST00000390649 3888 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AL353763.2-201ENST00000623489 1903 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 THAP12P3-201ENST00000456373 2266 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 EIF4BP4-201ENST00000441847 1780 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 CCAT2-201ENST00000630920 1752 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 CDY4P-201ENST00000418290 1513 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 CD200-203ENST00000473539 1524 ntTSL 2 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 FAM13C-215ENST00000614220 3388 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 OR10G4-201ENST00000320891 936 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 RNA5SP71-201ENST00000362967 126 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 ARR3-202ENST00000374495 1298 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 RNU6-1009P-201ENST00000390996 107 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 GSTA12P-201ENST00000402398 508 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 TCEA1P4-201ENST00000415066 844 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AC068137.1-201ENST00000429272 584 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 NDUFA5P4-201ENST00000436704 385 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 CLUHP5-201ENST00000438421 774 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AC239367.1-201ENST00000439389 936 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 S100A13-204ENST00000440685 686 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 CHRM3-AS1-201ENST00000444721 486 ntTSL 2 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 SFTPA3P-201ENST00000446429 367 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 RPL4P2-201ENST00000447259 1282 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AC007327.1-201ENST00000447461 264 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 LINC01007-203ENST00000451953 579 ntTSL 4 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 OR2AF1P-201ENST00000454899 889 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 DNAJC9-AS1-203ENST00000457758 548 ntTSL 3 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 RPS27P12-201ENST00000464146 258 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 RN7SL74P-201ENST00000464966 299 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AC069528.1-202ENST00000482888 637 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AC090058.1-201ENST00000498788 435 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 FAM92A1P2-202ENST00000504766 877 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 LINC01948-201ENST00000506836 656 ntTSL 2 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 RNA5SP303-201ENST00000516192 130 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 OR5AK3P-201ENST00000527486 1297 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 BCAP31P2-201ENST00000563143 399 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 BCAP31P1-201ENST00000565437 385 ntBASIC8.05□□□□□ -1.12
CUEDC1Q9NWM3 CCDC58P1-201ENST00000578567 430 ntBASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 382.9 ms