Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RPLP0P1-201ENST00000457002 361 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 WBP1LP1-201ENST00000460451 896 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX3Q99909 RPSAP48-201ENST00000466509 889 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 RPL23P10-201ENST00000468780 412 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 SNRPCP3-201ENST00000474888 476 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 AL591122.1-201ENST00000487348 492 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.78□□□□□ -1.48
SSX3Q99909 RPL10P7-201ENST00000495649 625 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 RN7SL104P-201ENST00000498686 293 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX3Q99909 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.78□□□□□ -1.48
SSX3Q99909 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX3Q99909 Vault.2-201ENST00000516519 98 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX3Q99909 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSX3Q99909 AC084337.1-201ENST00000524809 686 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 AP001803.1-201ENST00000525668 147 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX3Q99909 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.78□□□□□ -1.48
SSX3Q99909 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC5.78□□□□□ -1.48
SSX3Q99909 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.78□□□□□ -1.48
SSX3Q99909 EEF1B2P1-201ENST00000567221 672 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC5.78□□□□□ -1.48
SSX3Q99909 AC091932.1-201ENST00000569381 427 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.78□□□□□ -1.48
SSX3Q99909 MIR5095-201ENST00000578844 88 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC5.78□□□□□ -1.48
SSX3Q99909 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC5.78□□□□□ -1.48
SSX3Q99909 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC5.78□□□□□ -1.48
SSX3Q99909 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
SSX3Q99909 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.78□□□□□ -1.48
SSX3Q99909 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SSX3Q99909 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC5.78□□□□□ -1.48
SSX3Q99909 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.78□□□□□ -1.48
SSX3Q99909 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.78□□□□□ -1.48
SSX3Q99909 AC183089.2-201ENST00000637931 916 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSX3Q99909 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.78□□□□□ -1.48
SSX3Q99909 DDX18P6-201ENST00000450119 1997 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC5.78□□□□□ -1.48
SSX3Q99909 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX3Q99909 FO082842.1-201ENST00000423552 1370 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SSX3Q99909 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX3Q99909 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX3Q99909 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSX3Q99909 MSL3P1-202ENST00000440028 1468 ntBASIC5.77□□□□□ -1.49
SSX3Q99909 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX3Q99909 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX3Q99909 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SSX3Q99909 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSX3Q99909 MED6-212ENST00000615788 1700 ntTSL 5 BASIC5.77□□□□□ -1.49
SSX3Q99909 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.77□□□□□ -1.49
SSX3Q99909 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SSX3Q99909 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX3Q99909 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX3Q99909 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSX3Q99909 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC5.77□□□□□ -1.49
SSX3Q99909 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSX3Q99909 IMMTP1-201ENST00000435590 2219 ntBASIC5.77□□□□□ -1.49
SSX3Q99909 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSX3Q99909 RNA5SP114-201ENST00000363780 113 ntBASIC5.77□□□□□ -1.49
SSX3Q99909 SNORA70.5-201ENST00000365519 135 ntBASIC5.77□□□□□ -1.49
SSX3Q99909 CNN3P1-201ENST00000401596 935 ntBASIC5.77□□□□□ -1.49
SSX3Q99909 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC5.77□□□□□ -1.49
SSX3Q99909 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC5.77□□□□□ -1.49
SSX3Q99909 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC5.77□□□□□ -1.49
SSX3Q99909 RN7SKP85-201ENST00000411349 318 ntBASIC5.77□□□□□ -1.49
SSX3Q99909 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.77□□□□□ -1.49
SSX3Q99909 NFYAP1-201ENST00000431953 972 ntBASIC5.77□□□□□ -1.49
SSX3Q99909 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSX3Q99909 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.77□□□□□ -1.49
SSX3Q99909 PSPC1P2-201ENST00000455130 225 ntBASIC5.77□□□□□ -1.49
SSX3Q99909 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC5.77□□□□□ -1.49
SSX3Q99909 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.77□□□□□ -1.49
SSX3Q99909 RPSAP7-201ENST00000456871 885 ntBASIC5.77□□□□□ -1.49
SSX3Q99909 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.77□□□□□ -1.49
SSX3Q99909 AC026336.1-201ENST00000466577 351 ntBASIC5.77□□□□□ -1.49
SSX3Q99909 AC091982.1-202ENST00000473923 343 ntBASIC5.77□□□□□ -1.49
SSX3Q99909 AC026826.1-201ENST00000493002 361 ntBASIC5.77□□□□□ -1.49
SSX3Q99909 PFN2-217ENST00000498307 556 ntTSL 4 BASIC5.77□□□□□ -1.49
SSX3Q99909 AC093325.1-201ENST00000508378 326 ntBASIC5.77□□□□□ -1.49
SSX3Q99909 LDHAP1-201ENST00000509421 992 ntBASIC5.77□□□□□ -1.49
SSX3Q99909 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.77□□□□□ -1.49
SSX3Q99909 RNA5SP96-201ENST00000516041 107 ntBASIC5.77□□□□□ -1.49
SSX3Q99909 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC5.77□□□□□ -1.49
SSX3Q99909 ST13P6-201ENST00000522430 1102 ntBASIC5.77□□□□□ -1.49
SSX3Q99909 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC5.77□□□□□ -1.49
SSX3Q99909 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.77□□□□□ -1.49
SSX3Q99909 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.77□□□□□ -1.49
SSX3Q99909 OR7E19P-202ENST00000589942 844 ntBASIC5.77□□□□□ -1.49
SSX3Q99909 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.77□□□□□ -1.49
SSX3Q99909 AL008582.1-201ENST00000609612 442 ntBASIC5.77□□□□□ -1.49
SSX3Q99909 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC5.77□□□□□ -1.49
SSX3Q99909 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC5.77□□□□□ -1.49
SSX3Q99909 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC5.77□□□□□ -1.49
SSX3Q99909 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSX3Q99909 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC5.77□□□□□ -1.49
SSX3Q99909 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms