Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MTCYBP7-201ENST00000419540 1134 ntBASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AHCYP8-201ENST00000425108 209 ntBASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AC011242.1-201ENST00000433596 1158 ntBASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 VN1R110P-201ENST00000438988 971 ntBASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 DEFA11P-201ENST00000446470 261 ntBASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AC069277.2-201ENST00000454211 432 ntBASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 RPL23AP80-201ENST00000495605 424 ntBASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AC021146.11-201ENST00000503319 491 ntBASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 HMGN1P15-201ENST00000513870 295 ntBASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AC026774.2-201ENST00000513990 1098 ntBASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 OR4A21P-201ENST00000532759 944 ntBASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AC245128.3-201ENST00000594721 748 ntBASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AC004908.1-201ENST00000606572 541 ntBASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 PCA3_2.1-201ENST00000612507 409 ntBASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AC106782.7-201ENST00000624024 418 ntBASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AC139792.2-201ENST00000624218 587 ntBASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AC133555.5-201ENST00000624430 418 ntBASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AC095038.1-201ENST00000429248 1591 ntBASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 NCOA4P3-201ENST00000513203 1877 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 NBPF8-201ENST00000583271 5330 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AL512329.1-201ENST00000404600 1592 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 RN7SKP191-201ENST00000364713 306 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 RN7SKP130-201ENST00000364924 301 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 MIR199B-201ENST00000384849 110 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 MIR1204-201ENST00000408388 67 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 ETF1P1-206ENST00000427296 984 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AL512661.1-201ENST00000434586 1253 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AC234771.4-201ENST00000441416 730 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 RN7SL216P-201ENST00000471607 298 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AC021146.5-201ENST00000503544 545 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AC093878.1-201ENST00000515630 432 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AC113191.1-201ENST00000517759 403 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 CHEK2P2-201ENST00000554701 672 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 PPIAP6-201ENST00000557078 499 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 CD24P2-201ENST00000565486 219 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AC087575.1-201ENST00000585087 229 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AC020914.7-201ENST00000594477 545 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AL137000.1-201ENST00000610528 1244 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 NF1P10-201ENST00000613227 742 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 Z99129.2-201ENST00000619967 314 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AC026422.1-201ENST00000623961 452 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms