Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 RAD1P2-201ENST00000446414 663 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 TPRKBP1-201ENST00000456243 481 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AC026254.2-201ENST00000475295 371 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AK5-208ENST00000478255 556 ntTSL 2 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AC117395.1-201ENST00000487390 403 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AC008868.1-201ENST00000509786 737 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AC096661.1-201ENST00000515870 822 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AC087752.2-201ENST00000521219 281 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 OR5BK1P-201ENST00000550421 823 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AC093524.1-201ENST00000564266 1094 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AC004232.1-201ENST00000571388 208 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 MIR4312-201ENST00000579909 76 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AL512430.4-201ENST00000603085 613 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AC020765.1-201ENST00000604296 328 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AL590032.1-201ENST00000604920 252 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AC106782.7-201ENST00000624024 418 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 MTCO1P1-201ENST00000624263 1081 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AC133555.5-201ENST00000624430 418 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 SLC2A3P4-201ENST00000521259 1471 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 AC083806.2-201ENST00000617795 2685 ntBASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 MRPL32P1-201ENST00000406301 247 ntBASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 OR52N3P-201ENST00000413417 934 ntBASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 AC096537.2-201ENST00000413707 714 ntBASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 AC245452.2-201ENST00000435222 392 ntBASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 RPL7AP71-201ENST00000451120 739 ntBASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 AL513343.1-201ENST00000451818 792 ntBASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 HNRNPDLP2-201ENST00000455248 751 ntBASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 EIF3LP2-201ENST00000457262 807 ntBASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 PFN2-213ENST00000494827 793 ntTSL 4 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 MORF4L2P1-201ENST00000503761 858 ntBASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 SNRPCP6-201ENST00000528310 210 ntBASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 AP004607.5-201ENST00000532034 217 ntBASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 AC010287.1-201ENST00000566916 357 ntBASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 RN7SL270P-201ENST00000579643 281 ntBASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 SNORA16A-202ENST00000628458 135 ntBASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 AC091948.2-201ENST00000636510 279 ntBASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDK5RAP3Q96JB5 AL596244.1-201ENST00000567068 3779 ntBASIC7.59□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms