Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NKX6-1P78426 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NKX6-1P78426 THAP12P7-201ENST00000520248 2290 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 LRRC2-AS1-201ENST00000599511 2291 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NKX6-1P78426 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.42□□□□□ -1.38
NKX6-1P78426 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.42□□□□□ -1.38
NKX6-1P78426 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NKX6-1P78426 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NKX6-1P78426 AC067942.1-201ENST00000488045 1493 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.41□□□□□ -1.38
NKX6-1P78426 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
NKX6-1P78426 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NKX6-1P78426 SAMMSON-203ENST00000641005 2168 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NKX6-1P78426 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.41□□□□□ -1.38
NKX6-1P78426 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
NKX6-1P78426 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC6.41□□□□□ -1.38
NKX6-1P78426 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
NKX6-1P78426 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
NKX6-1P78426 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NKX6-1P78426 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NKX6-1P78426 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.41□□□□□ -1.38
NKX6-1P78426 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NKX6-1P78426 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC6.41□□□□□ -1.38
NKX6-1P78426 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
NKX6-1P78426 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
NKX6-1P78426 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NKX6-1P78426 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
NKX6-1P78426 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
NKX6-1P78426 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NKX6-1P78426 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NKX6-1P78426 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.41□□□□□ -1.38
NKX6-1P78426 RNA5SP177-201ENST00000410122 107 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 AL024507.1-201ENST00000412741 274 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 TATDN1P1-201ENST00000414123 891 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 AC009413.1-201ENST00000414823 399 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC6.41□□□□□ -1.38
NKX6-1P78426 BTF3P9-201ENST00000418784 283 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 FTOP1-201ENST00000419363 861 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 RAC1P4-201ENST00000419413 579 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.41□□□□□ -1.38
NKX6-1P78426 AL022100.1-202ENST00000421214 548 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.41□□□□□ -1.38
NKX6-1P78426 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC6.41□□□□□ -1.38
NKX6-1P78426 FUNDC2P2-202ENST00000443452 493 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.41□□□□□ -1.38
NKX6-1P78426 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC6.41□□□□□ -1.38
NKX6-1P78426 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.41□□□□□ -1.38
NKX6-1P78426 RN7SL153P-201ENST00000486501 292 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 AC008040.4-201ENST00000494834 768 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 SSX8-201ENST00000506270 579 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.41□□□□□ -1.38
NKX6-1P78426 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.41□□□□□ -1.38
NKX6-1P78426 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.41□□□□□ -1.38
NKX6-1P78426 IGKV2-29-201ENST00000521304 372 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 PTTG3P-201ENST00000521862 606 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 AC131935.1-201ENST00000524621 333 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.41□□□□□ -1.38
NKX6-1P78426 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.41□□□□□ -1.38
NKX6-1P78426 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.41□□□□□ -1.38
NKX6-1P78426 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC6.41□□□□□ -1.38
NKX6-1P78426 AL512310.9-201ENST00000553311 948 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 AC005632.2-201ENST00000564271 828 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.41□□□□□ -1.38
NKX6-1P78426 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NKX6-1P78426 DIMT1P1-201ENST00000603970 763 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.41□□□□□ -1.38
NKX6-1P78426 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.41□□□□□ -1.38
NKX6-1P78426 uc_338.37-201ENST00000620113 186 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 AC025287.2-201ENST00000621911 668 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 AC090617.9-201ENST00000623751 147 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 AC073342.3-201ENST00000624211 193 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.41□□□□□ -1.38
NKX6-1P78426 AC233280.20-201ENST00000637412 416 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 AC099654.8-201ENST00000637757 681 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 AC013437.2-201ENST00000639587 677 ntBASIC6.41□□□□□ -1.38
NKX6-1P78426 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NKX6-1P78426 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NKX6-1P78426 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NKX6-1P78426 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
NKX6-1P78426 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.41□□□□□ -1.38
NKX6-1P78426 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NKX6-1P78426 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
NKX6-1P78426 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NKX6-1P78426 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NKX6-1P78426 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NKX6-1P78426 RAD17P2-201ENST00000451754 1977 ntBASIC6.4□□□□□ -1.38
NKX6-1P78426 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NKX6-1P78426 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NKX6-1P78426 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NKX6-1P78426 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NKX6-1P78426 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.4□□□□□ -1.38
NKX6-1P78426 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC6.4□□□□□ -1.38
NKX6-1P78426 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC6.4□□□□□ -1.38
NKX6-1P78426 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NKX6-1P78426 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.4□□□□□ -1.38
NKX6-1P78426 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
NKX6-1P78426 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
NKX6-1P78426 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms