Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 Six3os1_1.1-201ENST00000620900 87 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.49□□□□□ -1.53
CX3CL1P78423 AL139384.2-201ENST00000613809 3590 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CL1P78423 AC022306.1-201ENST00000560489 1562 ntBASIC5.49□□□□□ -1.53
CX3CL1P78423 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CL1P78423 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CL1P78423 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
CX3CL1P78423 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.49□□□□□ -1.53
CX3CL1P78423 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CL1P78423 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CL1P78423 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.49□□□□□ -1.53
CX3CL1P78423 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CL1P78423 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CL1P78423 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
CX3CL1P78423 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.48□□□□□ -1.53
CX3CL1P78423 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
CX3CL1P78423 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC5.48□□□□□ -1.53
CX3CL1P78423 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC5.48□□□□□ -1.53
CX3CL1P78423 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CL1P78423 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CX3CL1P78423 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CL1P78423 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC5.48□□□□□ -1.53
CX3CL1P78423 AC022034.1-201ENST00000512867 2156 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CL1P78423 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC5.48□□□□□ -1.53
CX3CL1P78423 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CL1P78423 ATP5BP1-201ENST00000411980 1574 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CL1P78423 AC093844.1-201ENST00000514910 1361 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 MAPK10-379ENST00000642013 1385 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CX3CL1P78423 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CX3CL1P78423 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CX3CL1P78423 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CX3CL1P78423 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CL1P78423 RNU6-386P-201ENST00000362650 107 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 RNA5SP333-201ENST00000363466 118 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 RNA5SP334-201ENST00000364825 118 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 AL117344.1-201ENST00000407196 616 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.48□□□□□ -1.53
CX3CL1P78423 AC019070.1-201ENST00000415008 1024 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CL1P78423 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC5.48□□□□□ -1.53
CX3CL1P78423 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.48□□□□□ -1.53
CX3CL1P78423 MICG-208ENST00000416822 132 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CX3CL1P78423 SNX19-202ENST00000426933 888 ntTSL 2 BASIC5.48□□□□□ -1.53
CX3CL1P78423 RPL34P27-201ENST00000428810 349 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CX3CL1P78423 AC114402.2-201ENST00000432760 643 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CL1P78423 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC5.48□□□□□ -1.53
CX3CL1P78423 OR52I1-201ENST00000450052 1050 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 AL354714.5-201ENST00000450131 590 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 C1DP3-201ENST00000455013 423 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CX3CL1P78423 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC5.48□□□□□ -1.53
CX3CL1P78423 ATG10-AS1-201ENST00000504846 648 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC5.48□□□□□ -1.53
CX3CL1P78423 AC021820.1-201ENST00000525564 808 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC5.48□□□□□ -1.53
CX3CL1P78423 MIR4800-201ENST00000537353 80 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC5.48□□□□□ -1.53
CX3CL1P78423 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.48□□□□□ -1.53
CX3CL1P78423 AC126323.4-201ENST00000566935 234 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 AC091932.1-201ENST00000569381 427 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 RN7SL657P-201ENST00000582431 293 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 MIR5682-201ENST00000584864 76 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 MIR4428-201ENST00000584884 73 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 AC067852.5-201ENST00000589299 310 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.48□□□□□ -1.53
CX3CL1P78423 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 AC005753.1-201ENST00000623837 618 ntBASIC5.48□□□□□ -1.53
CX3CL1P78423 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.48□□□□□ -1.53
CX3CL1P78423 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.48□□□□□ -1.53
CX3CL1P78423 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CX3CL1P78423 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
CX3CL1P78423 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CL1P78423 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CL1P78423 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CX3CL1P78423 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CX3CL1P78423 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.48□□□□□ -1.53
CX3CL1P78423 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CX3CL1P78423 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CL1P78423 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CL1P78423 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CL1P78423 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC5.47□□□□□ -1.53
CX3CL1P78423 CUL4AP1-201ENST00000514750 1863 ntBASIC5.47□□□□□ -1.53
CX3CL1P78423 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.47□□□□□ -1.53
CX3CL1P78423 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.47□□□□□ -1.53
CX3CL1P78423 AL355377.1-201ENST00000621125 1653 ntBASIC5.47□□□□□ -1.53
CX3CL1P78423 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CL1P78423 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.47□□□□□ -1.53
CX3CL1P78423 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
CX3CL1P78423 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CX3CL1P78423 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.47□□□□□ -1.53
CX3CL1P78423 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CL1P78423 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms