Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC4.53□□□□□ -1.68
RPL39P62891 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC4.53□□□□□ -1.68
RPL39P62891 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC4.53□□□□□ -1.68
RPL39P62891 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC4.53□□□□□ -1.68
RPL39P62891 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC4.53□□□□□ -1.68
RPL39P62891 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC4.53□□□□□ -1.68
RPL39P62891 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC4.53□□□□□ -1.68
RPL39P62891 COX6CP16-201ENST00000603667 216 ntBASIC4.53□□□□□ -1.68
RPL39P62891 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC4.53□□□□□ -1.68
RPL39P62891 AC010480.1-201ENST00000624823 684 ntBASIC4.53□□□□□ -1.68
RPL39P62891 AC022726.2-201ENST00000634673 547 ntBASIC4.53□□□□□ -1.68
RPL39P62891 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC4.53□□□□□ -1.68
RPL39P62891 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPL39P62891 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RPL39P62891 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC4.53□□□□□ -1.68
RPL39P62891 ATP5A1P4-201ENST00000556888 1605 ntBASIC4.53□□□□□ -1.68
RPL39P62891 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RPL39P62891 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC4.53□□□□□ -1.68
RPL39P62891 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPL39P62891 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RPL39P62891 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RPL39P62891 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RPL39P62891 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RPL39P62891 AC093297.3-201ENST00000607056 2517 ntBASIC4.52□□□□□ -1.69
RPL39P62891 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RPL39P62891 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC4.52□□□□□ -1.69
RPL39P62891 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
RPL39P62891 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RPL39P62891 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RPL39P62891 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC4.52□□□□□ -1.69
RPL39P62891 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
RPL39P62891 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC4.52□□□□□ -1.69
RPL39P62891 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RPL39P62891 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RPL39P62891 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
RPL39P62891 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RPL39P62891 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
RPL39P62891 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RPL39P62891 RNA5SP478-201ENST00000364657 115 ntBASIC4.52□□□□□ -1.69
RPL39P62891 RPL23AP17-201ENST00000401064 499 ntBASIC4.52□□□□□ -1.69
RPL39P62891 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC4.52□□□□□ -1.69
RPL39P62891 RPS21P8-201ENST00000413365 247 ntBASIC4.52□□□□□ -1.69
RPL39P62891 MRPS21P5-201ENST00000417885 231 ntBASIC4.52□□□□□ -1.69
RPL39P62891 AC007562.1-201ENST00000421819 517 ntBASIC4.52□□□□□ -1.69
RPL39P62891 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC4.52□□□□□ -1.69
RPL39P62891 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC4.52□□□□□ -1.69
RPL39P62891 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC4.52□□□□□ -1.69
RPL39P62891 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC4.52□□□□□ -1.69
RPL39P62891 AC003989.1-201ENST00000434569 565 ntBASIC4.52□□□□□ -1.69
RPL39P62891 AC009518.3-201ENST00000438972 253 ntBASIC4.52□□□□□ -1.69
RPL39P62891 SNX18P9-201ENST00000440580 835 ntBASIC4.52□□□□□ -1.69
RPL39P62891 AC079922.1-201ENST00000443291 359 ntBASIC4.52□□□□□ -1.69
RPL39P62891 OR13K1P-201ENST00000444577 975 ntBASIC4.52□□□□□ -1.69
RPL39P62891 AC023274.2-201ENST00000445264 521 ntBASIC4.52□□□□□ -1.69
RPL39P62891 RPL26P30-201ENST00000453533 435 ntBASIC4.52□□□□□ -1.69
RPL39P62891 AL928654.1-201ENST00000476081 354 ntBASIC4.52□□□□□ -1.69
RPL39P62891 RPL7AP56-201ENST00000476420 791 ntBASIC4.52□□□□□ -1.69
RPL39P62891 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC4.52□□□□□ -1.69
RPL39P62891 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
RPL39P62891 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC4.52□□□□□ -1.69
RPL39P62891 REG4-204ENST00000530654 612 ntTSL 5 BASIC4.52□□□□□ -1.69
RPL39P62891 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC4.52□□□□□ -1.69
RPL39P62891 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC4.52□□□□□ -1.69
RPL39P62891 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC4.52□□□□□ -1.69
RPL39P62891 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC4.52□□□□□ -1.69
RPL39P62891 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC4.52□□□□□ -1.69
RPL39P62891 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC4.52□□□□□ -1.69
RPL39P62891 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC4.52□□□□□ -1.69
RPL39P62891 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RPL39P62891 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC4.52□□□□□ -1.69
RPL39P62891 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC4.52□□□□□ -1.69
RPL39P62891 AC104117.5-201ENST00000606195 547 ntBASIC4.52□□□□□ -1.69
RPL39P62891 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC4.52□□□□□ -1.69
RPL39P62891 AC006328.2-201ENST00000623198 397 ntBASIC4.52□□□□□ -1.69
RPL39P62891 AC012005.2-201ENST00000624333 397 ntBASIC4.52□□□□□ -1.69
RPL39P62891 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RPL39P62891 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RPL39P62891 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RPL39P62891 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RPL39P62891 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RPL39P62891 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RPL39P62891 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC4.52□□□□□ -1.69
RPL39P62891 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RPL39P62891 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RPL39P62891 AL359976.1-201ENST00000418655 3528 ntBASIC4.51□□□□□ -1.69
RPL39P62891 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RPL39P62891 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RPL39P62891 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC4.51□□□□□ -1.69
RPL39P62891 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RPL39P62891 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RPL39P62891 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
RPL39P62891 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RPL39P62891 AC023886.2-201ENST00000321285 411 ntBASIC4.51□□□□□ -1.69
RPL39P62891 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
RPL39P62891 SMARCE1P6-201ENST00000398372 1216 ntBASIC4.51□□□□□ -1.69
RPL39P62891 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RPL39P62891 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC4.51□□□□□ -1.69
RPL39P62891 NIP7P1-201ENST00000433227 512 ntBASIC4.51□□□□□ -1.69
RPL39P62891 RPL14P5-201ENST00000436474 730 ntBASIC4.51□□□□□ -1.69
RPL39P62891 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms