Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC010878.1-201ENST00000456500 1047 ntBASIC7.25□□□□□ -1.25
VCPP55072 AC094085.1-201ENST00000468914 584 ntBASIC7.25□□□□□ -1.25
VCPP55072 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.25□□□□□ -1.25
VCPP55072 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC7.25□□□□□ -1.25
VCPP55072 AC113367.2-201ENST00000505749 160 ntBASIC7.25□□□□□ -1.25
VCPP55072 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.25□□□□□ -1.25
VCPP55072 AC012146.2-201ENST00000576545 416 ntBASIC7.25□□□□□ -1.25
VCPP55072 RN7SL199P-201ENST00000578752 281 ntBASIC7.25□□□□□ -1.25
VCPP55072 RN7SL656P-201ENST00000579044 281 ntBASIC7.25□□□□□ -1.25
VCPP55072 RN7SL270P-201ENST00000579643 281 ntBASIC7.25□□□□□ -1.25
VCPP55072 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.25□□□□□ -1.25
VCPP55072 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.25□□□□□ -1.25
VCPP55072 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
VCPP55072 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC7.25□□□□□ -1.25
VCPP55072 AL365181.4-201ENST00000609800 547 ntBASIC7.25□□□□□ -1.25
VCPP55072 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7.25□□□□□ -1.25
VCPP55072 AC026124.2-201ENST00000621847 656 ntBASIC7.25□□□□□ -1.25
VCPP55072 AC127071.2-201ENST00000623293 527 ntBASIC7.25□□□□□ -1.25
VCPP55072 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
VCPP55072 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.25□□□□□ -1.25
VCPP55072 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
VCPP55072 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
VCPP55072 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.25□□□□□ -1.25
VCPP55072 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.25□□□□□ -1.25
VCPP55072 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
VCPP55072 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
VCPP55072 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
VCPP55072 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.24□□□□□ -1.25
VCPP55072 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
VCPP55072 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.24□□□□□ -1.25
VCPP55072 MAPK10-344ENST00000641718 3746 ntBASIC7.24□□□□□ -1.25
VCPP55072 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
VCPP55072 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
VCPP55072 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
VCPP55072 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.24□□□□□ -1.25
VCPP55072 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
VCPP55072 AC019178.1-201ENST00000392337 440 ntBASIC7.24□□□□□ -1.25
VCPP55072 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.24□□□□□ -1.25
VCPP55072 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.24□□□□□ -1.25
VCPP55072 AC007365.2-201ENST00000428806 458 ntBASIC7.24□□□□□ -1.25
VCPP55072 GAPDHP37-201ENST00000442317 968 ntBASIC7.24□□□□□ -1.25
VCPP55072 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.24□□□□□ -1.25
VCPP55072 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.24□□□□□ -1.25
VCPP55072 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.24□□□□□ -1.25
VCPP55072 PSMA6P2-201ENST00000457574 686 ntBASIC7.24□□□□□ -1.25
VCPP55072 AC005017.1-201ENST00000482002 490 ntBASIC7.24□□□□□ -1.25
VCPP55072 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.24□□□□□ -1.25
VCPP55072 RN7SKP98-201ENST00000517070 156 ntBASIC7.24□□□□□ -1.25
VCPP55072 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.24□□□□□ -1.25
VCPP55072 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.24□□□□□ -1.25
VCPP55072 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
VCPP55072 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.24□□□□□ -1.25
VCPP55072 ACTG1P15-201ENST00000570019 1063 ntBASIC7.24□□□□□ -1.25
VCPP55072 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
VCPP55072 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.24□□□□□ -1.25
VCPP55072 AC004241.2-201ENST00000614562 444 ntBASIC7.24□□□□□ -1.25
VCPP55072 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
VCPP55072 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.24□□□□□ -1.25
VCPP55072 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.24□□□□□ -1.25
VCPP55072 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.24□□□□□ -1.25
VCPP55072 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
VCPP55072 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
VCPP55072 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
VCPP55072 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
VCPP55072 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.24□□□□□ -1.25
VCPP55072 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
VCPP55072 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.24□□□□□ -1.25
VCPP55072 MROH3P-201ENST00000435735 2676 ntBASIC7.24□□□□□ -1.25
VCPP55072 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
VCPP55072 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC7.24□□□□□ -1.25
VCPP55072 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
VCPP55072 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.23□□□□□ -1.25
VCPP55072 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
VCPP55072 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
VCPP55072 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.23□□□□□ -1.25
VCPP55072 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
VCPP55072 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.23□□□□□ -1.25
VCPP55072 AP003486.1-201ENST00000525716 3994 ntBASIC7.23□□□□□ -1.25
VCPP55072 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
VCPP55072 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.23□□□□□ -1.25
VCPP55072 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
VCPP55072 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
VCPP55072 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
VCPP55072 CLCA3P-203ENST00000490028 2781 ntBASIC7.23□□□□□ -1.25
VCPP55072 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
VCPP55072 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
VCPP55072 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
VCPP55072 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
VCPP55072 FDPSP5-201ENST00000399474 1057 ntBASIC7.23□□□□□ -1.25
VCPP55072 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.23□□□□□ -1.25
VCPP55072 Z68694.1-201ENST00000413929 841 ntBASIC7.23□□□□□ -1.25
VCPP55072 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC7.23□□□□□ -1.25
VCPP55072 FABP5P1-201ENST00000423401 411 ntBASIC7.23□□□□□ -1.25
VCPP55072 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.23□□□□□ -1.25
VCPP55072 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC7.23□□□□□ -1.25
VCPP55072 OR6R1P-201ENST00000431838 940 ntBASIC7.23□□□□□ -1.25
VCPP55072 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.23□□□□□ -1.25
VCPP55072 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
VCPP55072 FABP5P2-201ENST00000439042 408 ntBASIC7.23□□□□□ -1.25
VCPP55072 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms