Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC7.14□□□□□ -1.27
SSR1P43307 MIR665-201ENST00000635949 72 ntBASIC7.14□□□□□ -1.27
SSR1P43307 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC7.14□□□□□ -1.27
SSR1P43307 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC7.14□□□□□ -1.27
SSR1P43307 AC009779.8-201ENST00000641684 4384 ntBASIC7.14□□□□□ -1.27
SSR1P43307 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SSR1P43307 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
SSR1P43307 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.14□□□□□ -1.27
SSR1P43307 AC079949.2-201ENST00000617117 2933 ntBASIC7.14□□□□□ -1.27
SSR1P43307 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
SSR1P43307 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
SSR1P43307 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
SSR1P43307 AC097063.1-201ENST00000426714 1797 ntBASIC7.13□□□□□ -1.27
SSR1P43307 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
SSR1P43307 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SSR1P43307 AL512329.1-201ENST00000404600 1592 ntBASIC7.13□□□□□ -1.27
SSR1P43307 TNPO1P2-201ENST00000426249 2665 ntBASIC7.13□□□□□ -1.27
SSR1P43307 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SSR1P43307 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.13□□□□□ -1.27
SSR1P43307 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SSR1P43307 AL662791.3-201ENST00000413771 776 ntBASIC7.13□□□□□ -1.27
SSR1P43307 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.13□□□□□ -1.27
SSR1P43307 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.13□□□□□ -1.27
SSR1P43307 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SSR1P43307 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.13□□□□□ -1.27
SSR1P43307 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.13□□□□□ -1.27
SSR1P43307 CLCN3P1-201ENST00000423965 1017 ntBASIC7.13□□□□□ -1.27
SSR1P43307 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.13□□□□□ -1.27
SSR1P43307 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.13□□□□□ -1.27
SSR1P43307 AL645936.2-201ENST00000430565 928 ntBASIC7.13□□□□□ -1.27
SSR1P43307 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.13□□□□□ -1.27
SSR1P43307 OSTCP2-201ENST00000437956 444 ntBASIC7.13□□□□□ -1.27
SSR1P43307 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.13□□□□□ -1.27
SSR1P43307 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.13□□□□□ -1.27
SSR1P43307 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
SSR1P43307 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC7.13□□□□□ -1.27
SSR1P43307 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC7.13□□□□□ -1.27
SSR1P43307 AC114755.1-201ENST00000453101 868 ntBASIC7.13□□□□□ -1.27
SSR1P43307 AL096803.1-201ENST00000456921 1021 ntBASIC7.13□□□□□ -1.27
SSR1P43307 NMNAT1P3-201ENST00000457517 888 ntBASIC7.13□□□□□ -1.27
SSR1P43307 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC7.13□□□□□ -1.27
SSR1P43307 CBX5P1-201ENST00000468470 561 ntBASIC7.13□□□□□ -1.27
SSR1P43307 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.13□□□□□ -1.27
SSR1P43307 AC087752.2-201ENST00000521219 281 ntBASIC7.13□□□□□ -1.27
SSR1P43307 AC107952.1-201ENST00000524200 376 ntBASIC7.13□□□□□ -1.27
SSR1P43307 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC7.13□□□□□ -1.27
SSR1P43307 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.13□□□□□ -1.27
SSR1P43307 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC7.13□□□□□ -1.27
SSR1P43307 MIR4428-201ENST00000584884 73 ntBASIC7.13□□□□□ -1.27
SSR1P43307 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC7.13□□□□□ -1.27
SSR1P43307 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC7.13□□□□□ -1.27
SSR1P43307 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC7.13□□□□□ -1.27
SSR1P43307 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.13□□□□□ -1.27
SSR1P43307 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.13□□□□□ -1.27
SSR1P43307 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC7.13□□□□□ -1.27
SSR1P43307 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC7.13□□□□□ -1.27
SSR1P43307 AL354718.1-201ENST00000619764 589 ntBASIC7.13□□□□□ -1.27
SSR1P43307 AC073862.4-201ENST00000622982 854 ntBASIC7.13□□□□□ -1.27
SSR1P43307 AL354702.2-202ENST00000641481 890 ntBASIC7.13□□□□□ -1.27
SSR1P43307 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
SSR1P43307 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.13□□□□□ -1.27
SSR1P43307 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SSR1P43307 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
SSR1P43307 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.13□□□□□ -1.27
SSR1P43307 AC026523.2-201ENST00000625039 7739 ntBASIC7.13□□□□□ -1.27
SSR1P43307 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
SSR1P43307 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SSR1P43307 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSR1P43307 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSR1P43307 AC020633.1-201ENST00000468439 2247 ntBASIC7.12□□□□□ -1.27
SSR1P43307 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.12□□□□□ -1.27
SSR1P43307 EEF1A1P16-201ENST00000325349 1414 ntBASIC7.12□□□□□ -1.27
SSR1P43307 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSR1P43307 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSR1P43307 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSR1P43307 QRSL1P3-201ENST00000552666 1316 ntBASIC7.12□□□□□ -1.27
SSR1P43307 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
SSR1P43307 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SSR1P43307 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC7.12□□□□□ -1.27
SSR1P43307 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.12□□□□□ -1.27
SSR1P43307 PAICSP2-201ENST00000429118 1150 ntBASIC7.12□□□□□ -1.27
SSR1P43307 FECHP1-201ENST00000431896 1214 ntBASIC7.12□□□□□ -1.27
SSR1P43307 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC7.12□□□□□ -1.27
SSR1P43307 AC239800.1-201ENST00000442049 719 ntBASIC7.12□□□□□ -1.27
SSR1P43307 BX005266.3-201ENST00000443013 1075 ntBASIC7.12□□□□□ -1.27
SSR1P43307 AL161722.1-201ENST00000446972 1032 ntBASIC7.12□□□□□ -1.27
SSR1P43307 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7.12□□□□□ -1.27
SSR1P43307 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC7.12□□□□□ -1.27
SSR1P43307 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.12□□□□□ -1.27
SSR1P43307 RPS4XP19-201ENST00000460237 736 ntBASIC7.12□□□□□ -1.27
SSR1P43307 PPP1R2P6-201ENST00000478565 588 ntBASIC7.12□□□□□ -1.27
SSR1P43307 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.12□□□□□ -1.27
SSR1P43307 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC7.12□□□□□ -1.27
SSR1P43307 AC010409.2-201ENST00000505780 478 ntBASIC7.12□□□□□ -1.27
SSR1P43307 RN7SKP11-201ENST00000517018 287 ntBASIC7.12□□□□□ -1.27
SSR1P43307 IGKV2-19-201ENST00000518132 283 ntBASIC7.12□□□□□ -1.27
SSR1P43307 IGHVII-51-2-201ENST00000519778 259 ntBASIC7.12□□□□□ -1.27
SSR1P43307 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC7.12□□□□□ -1.27
SSR1P43307 AC021820.1-201ENST00000525564 808 ntBASIC7.12□□□□□ -1.27
SSR1P43307 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms