Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HTTP42858 NRIR-201ENST00000366140 799 ntTSL 3 BASIC6.84□□□□□ -1.31
HTTP42858 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.84□□□□□ -1.31
HTTP42858 AC245047.2-201ENST00000441060 530 ntBASIC6.84□□□□□ -1.31
HTTP42858 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.84□□□□□ -1.31
HTTP42858 AC021146.10-201ENST00000515628 706 ntBASIC6.84□□□□□ -1.31
HTTP42858 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.84□□□□□ -1.31
HTTP42858 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.84□□□□□ -1.31
HTTP42858 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.84□□□□□ -1.31
HTTP42858 AC090510.2-201ENST00000617465 629 ntBASIC6.84□□□□□ -1.31
HTTP42858 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HTTP42858 SRGAP2B-204ENST00000612199 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
HTTP42858 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.32
HTTP42858 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
HTTP42858 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC6.84□□□□□ -1.32
HTTP42858 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
HTTP42858 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
HTTP42858 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC6.83□□□□□ -1.32
HTTP42858 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
HTTP42858 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
HTTP42858 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HTTP42858 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HTTP42858 POGZ-203ENST00000368863 6054 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HTTP42858 MIR1286-201ENST00000408112 78 ntBASIC6.83□□□□□ -1.32
HTTP42858 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.83□□□□□ -1.32
HTTP42858 AL022331.1-201ENST00000429025 477 ntBASIC6.83□□□□□ -1.32
HTTP42858 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.83□□□□□ -1.32
HTTP42858 AL139156.3-201ENST00000454802 394 ntBASIC6.83□□□□□ -1.32
HTTP42858 AC103563.5-201ENST00000455643 364 ntBASIC6.83□□□□□ -1.32
HTTP42858 AL157777.1-201ENST00000468100 304 ntBASIC6.83□□□□□ -1.32
HTTP42858 IGKV1D-22-201ENST00000518953 324 ntBASIC6.83□□□□□ -1.32
HTTP42858 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.83□□□□□ -1.32
HTTP42858 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.83□□□□□ -1.32
HTTP42858 AMOTL1-202ENST00000317829 8844 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HTTP42858 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.83□□□□□ -1.32
HTTP42858 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
HTTP42858 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
HTTP42858 MRRFP1-201ENST00000435941 1675 ntBASIC6.83□□□□□ -1.32
HTTP42858 DDHD1-210ENST00000612692 12339 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HTTP42858 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HTTP42858 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
HTTP42858 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
HTTP42858 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.83□□□□□ -1.32
HTTP42858 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.83□□□□□ -1.32
HTTP42858 DEFA11P-201ENST00000446470 261 ntBASIC6.83□□□□□ -1.32
HTTP42858 HIGD1AP8-201ENST00000453927 274 ntBASIC6.83□□□□□ -1.32
HTTP42858 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.83□□□□□ -1.32
HTTP42858 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.83□□□□□ -1.32
HTTP42858 AC110056.1-201ENST00000525759 911 ntBASIC6.83□□□□□ -1.32
HTTP42858 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.83□□□□□ -1.32
HTTP42858 AP001496.3-201ENST00000580230 913 ntBASIC6.83□□□□□ -1.32
HTTP42858 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.83□□□□□ -1.32
HTTP42858 OR7A1P-201ENST00000601206 970 ntBASIC6.83□□□□□ -1.32
HTTP42858 AC087763.1-201ENST00000603391 286 ntBASIC6.83□□□□□ -1.32
HTTP42858 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HTTP42858 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HTTP42858 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.83□□□□□ -1.32
HTTP42858 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.83□□□□□ -1.32
HTTP42858 TNS1-221ENST00000615025 6488 ntTSL 5 BASIC6.83□□□□□ -1.32
HTTP42858 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HTTP42858 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HTTP42858 MAPK10-365ENST00000641902 3825 ntBASIC6.83□□□□□ -1.32
HTTP42858 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
HTTP42858 WSB1-201ENST00000262394 5139 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HTTP42858 TMOD3-201ENST00000308580 8255 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HTTP42858 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.83□□□□□ -1.32
HTTP42858 RPS2P45-201ENST00000469997 2057 ntBASIC6.83□□□□□ -1.32
HTTP42858 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HTTP42858 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HTTP42858 AFDN-207ENST00000400822 7593 ntTSL 5 BASIC6.83□□□□□ -1.32
HTTP42858 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
HTTP42858 U8.4-201ENST00000363626 134 ntBASIC6.83□□□□□ -1.32
HTTP42858 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
HTTP42858 RPL35AP31-201ENST00000418340 337 ntBASIC6.83□□□□□ -1.32
HTTP42858 PSMC1P2-201ENST00000423961 1204 ntBASIC6.83□□□□□ -1.32
HTTP42858 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.83□□□□□ -1.32
HTTP42858 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.83□□□□□ -1.32
HTTP42858 AC093890.1-201ENST00000502554 540 ntBASIC6.83□□□□□ -1.32
HTTP42858 AC115837.1-201ENST00000517662 1001 ntBASIC6.83□□□□□ -1.32
HTTP42858 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.83□□□□□ -1.32
HTTP42858 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.83□□□□□ -1.32
HTTP42858 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.83□□□□□ -1.32
HTTP42858 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
HTTP42858 AC034229.6-201ENST00000623704 224 ntBASIC6.83□□□□□ -1.32
HTTP42858 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HTTP42858 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HTTP42858 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
HTTP42858 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.82□□□□□ -1.32
HTTP42858 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.82□□□□□ -1.32
HTTP42858 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
HTTP42858 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.82□□□□□ -1.32
HTTP42858 AL050335.1-201ENST00000396909 869 ntBASIC6.82□□□□□ -1.32
HTTP42858 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.82□□□□□ -1.32
HTTP42858 PA2G4P6-201ENST00000438325 1197 ntBASIC6.82□□□□□ -1.32
HTTP42858 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.82□□□□□ -1.32
HTTP42858 RN7SL583P-201ENST00000475692 287 ntBASIC6.82□□□□□ -1.32
HTTP42858 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.82□□□□□ -1.32
HTTP42858 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.82□□□□□ -1.32
HTTP42858 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.82□□□□□ -1.32
HTTP42858 AC009120.3-201ENST00000563335 499 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms