Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.07□□□□□ -1.44
APOBEC1P41238 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
APOBEC1P41238 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
APOBEC1P41238 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
APOBEC1P41238 Z93929.1-201ENST00000418200 1475 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
APOBEC1P41238 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
APOBEC1P41238 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
APOBEC1P41238 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
APOBEC1P41238 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
APOBEC1P41238 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
APOBEC1P41238 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
APOBEC1P41238 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.07□□□□□ -1.44
APOBEC1P41238 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.07□□□□□ -1.44
APOBEC1P41238 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
APOBEC1P41238 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
APOBEC1P41238 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
APOBEC1P41238 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.06□□□□□ -1.44
APOBEC1P41238 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.06□□□□□ -1.44
APOBEC1P41238 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
APOBEC1P41238 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.06□□□□□ -1.44
APOBEC1P41238 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
APOBEC1P41238 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.06□□□□□ -1.44
APOBEC1P41238 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
APOBEC1P41238 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
APOBEC1P41238 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
APOBEC1P41238 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
APOBEC1P41238 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
APOBEC1P41238 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
APOBEC1P41238 TRAV35-201ENST00000390462 330 ntBASIC6.06□□□□□ -1.44
APOBEC1P41238 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
APOBEC1P41238 BMS1P11-201ENST00000442351 885 ntBASIC6.06□□□□□ -1.44
APOBEC1P41238 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.06□□□□□ -1.44
APOBEC1P41238 RPL26P30-201ENST00000453533 435 ntBASIC6.06□□□□□ -1.44
APOBEC1P41238 BMS1P9-201ENST00000457640 885 ntBASIC6.06□□□□□ -1.44
APOBEC1P41238 AC063943.2-201ENST00000495697 534 ntBASIC6.06□□□□□ -1.44
APOBEC1P41238 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.06□□□□□ -1.44
APOBEC1P41238 AC008868.1-201ENST00000509786 737 ntBASIC6.06□□□□□ -1.44
APOBEC1P41238 CCNHP1-201ENST00000513311 678 ntBASIC6.06□□□□□ -1.44
APOBEC1P41238 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.06□□□□□ -1.44
APOBEC1P41238 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.06□□□□□ -1.44
APOBEC1P41238 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.06□□□□□ -1.44
APOBEC1P41238 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.06□□□□□ -1.44
APOBEC1P41238 AC007068.2-201ENST00000543168 395 ntBASIC6.06□□□□□ -1.44
APOBEC1P41238 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC6.06□□□□□ -1.44
APOBEC1P41238 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.06□□□□□ -1.44
APOBEC1P41238 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.06□□□□□ -1.44
APOBEC1P41238 AC244034.2-201ENST00000562504 509 ntBASIC6.06□□□□□ -1.44
APOBEC1P41238 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
APOBEC1P41238 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.06□□□□□ -1.44
APOBEC1P41238 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.06□□□□□ -1.44
APOBEC1P41238 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.06□□□□□ -1.44
APOBEC1P41238 AL353684.1-201ENST00000622677 1120 ntBASIC6.06□□□□□ -1.44
APOBEC1P41238 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.06□□□□□ -1.44
APOBEC1P41238 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.06□□□□□ -1.44
APOBEC1P41238 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.06□□□□□ -1.44
APOBEC1P41238 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
APOBEC1P41238 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.06□□□□□ -1.44
APOBEC1P41238 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.06□□□□□ -1.44
APOBEC1P41238 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
APOBEC1P41238 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.06□□□□□ -1.44
APOBEC1P41238 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
APOBEC1P41238 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
APOBEC1P41238 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
APOBEC1P41238 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
APOBEC1P41238 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.05□□□□□ -1.44
APOBEC1P41238 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
APOBEC1P41238 AC022507.1-201ENST00000548349 1505 ntBASIC6.05□□□□□ -1.44
APOBEC1P41238 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.05□□□□□ -1.44
APOBEC1P41238 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
APOBEC1P41238 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
APOBEC1P41238 AC008957.3-201ENST00000624112 2242 ntBASIC6.05□□□□□ -1.44
APOBEC1P41238 AL136531.3-201ENST00000624378 3658 ntBASIC6.05□□□□□ -1.44
APOBEC1P41238 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
APOBEC1P41238 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
APOBEC1P41238 AC073342.2-201ENST00000595842 1800 ntBASIC6.05□□□□□ -1.44
APOBEC1P41238 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
APOBEC1P41238 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
APOBEC1P41238 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
APOBEC1P41238 RNA5SP321-201ENST00000362722 111 ntBASIC6.05□□□□□ -1.44
APOBEC1P41238 SNORA38B-201ENST00000363524 131 ntBASIC6.05□□□□□ -1.44
APOBEC1P41238 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.05□□□□□ -1.44
APOBEC1P41238 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.05□□□□□ -1.44
APOBEC1P41238 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.05□□□□□ -1.44
APOBEC1P41238 AC013410.1-201ENST00000436223 1232 ntBASIC6.05□□□□□ -1.44
APOBEC1P41238 PMS2P9-201ENST00000441237 515 ntBASIC6.05□□□□□ -1.44
APOBEC1P41238 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.05□□□□□ -1.44
APOBEC1P41238 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.05□□□□□ -1.44
APOBEC1P41238 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.05□□□□□ -1.44
APOBEC1P41238 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.05□□□□□ -1.44
APOBEC1P41238 AC022080.2-201ENST00000452932 533 ntBASIC6.05□□□□□ -1.44
APOBEC1P41238 AL139156.3-201ENST00000454802 394 ntBASIC6.05□□□□□ -1.44
APOBEC1P41238 SULT1D1P-201ENST00000458020 882 ntBASIC6.05□□□□□ -1.44
APOBEC1P41238 RN7SKP198-201ENST00000459286 306 ntBASIC6.05□□□□□ -1.44
APOBEC1P41238 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.05□□□□□ -1.44
APOBEC1P41238 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.05□□□□□ -1.44
APOBEC1P41238 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC6.05□□□□□ -1.44
APOBEC1P41238 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.05□□□□□ -1.44
APOBEC1P41238 AC083906.1-201ENST00000509298 406 ntBASIC6.05□□□□□ -1.44
APOBEC1P41238 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms