Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC7.45□□□□□ -1.22
CIITAP33076 AC013403.1-201ENST00000436954 263 ntBASIC7.45□□□□□ -1.22
CIITAP33076 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.45□□□□□ -1.22
CIITAP33076 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.45□□□□□ -1.22
CIITAP33076 RN7SL413P-201ENST00000482700 297 ntBASIC7.45□□□□□ -1.22
CIITAP33076 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
CIITAP33076 AC093664.1-201ENST00000511779 289 ntBASIC7.45□□□□□ -1.22
CIITAP33076 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.45□□□□□ -1.22
CIITAP33076 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC7.45□□□□□ -1.22
CIITAP33076 RPL41P2-201ENST00000544920 409 ntBASIC7.45□□□□□ -1.22
CIITAP33076 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.45□□□□□ -1.22
CIITAP33076 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CIITAP33076 AL109924.4-201ENST00000623089 670 ntBASIC7.45□□□□□ -1.22
CIITAP33076 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CIITAP33076 AC009950.2-201ENST00000636548 183 ntBASIC7.45□□□□□ -1.22
CIITAP33076 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CIITAP33076 MAPK10-383ENST00000642032 3390 ntBASIC7.45□□□□□ -1.22
CIITAP33076 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CIITAP33076 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
CIITAP33076 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CIITAP33076 AC092821.2-201ENST00000545710 2042 ntBASIC7.45□□□□□ -1.22
CIITAP33076 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CIITAP33076 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CIITAP33076 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
CIITAP33076 AC122713.2-201ENST00000624942 3335 ntBASIC7.45□□□□□ -1.22
CIITAP33076 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.45□□□□□ -1.22
CIITAP33076 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
CIITAP33076 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.44□□□□□ -1.22
CIITAP33076 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.44□□□□□ -1.22
CIITAP33076 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.44□□□□□ -1.22
CIITAP33076 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CIITAP33076 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
CIITAP33076 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CIITAP33076 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.44□□□□□ -1.22
CIITAP33076 AC107980.1-201ENST00000558671 3355 ntBASIC7.44□□□□□ -1.22
CIITAP33076 AC009120.2-204ENST00000621548 2032 ntBASIC7.44□□□□□ -1.22
CIITAP33076 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CIITAP33076 API5P1-201ENST00000424316 1510 ntBASIC7.44□□□□□ -1.22
CIITAP33076 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CIITAP33076 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CIITAP33076 RNU1-24P-201ENST00000364285 165 ntBASIC7.44□□□□□ -1.22
CIITAP33076 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.44□□□□□ -1.22
CIITAP33076 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CIITAP33076 RN7SKP146-201ENST00000410242 334 ntBASIC7.44□□□□□ -1.22
CIITAP33076 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.44□□□□□ -1.22
CIITAP33076 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.44□□□□□ -1.22
CIITAP33076 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CIITAP33076 AC083862.1-201ENST00000427378 1242 ntBASIC7.44□□□□□ -1.22
CIITAP33076 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.44□□□□□ -1.22
CIITAP33076 ARMC4P1-201ENST00000438905 707 ntBASIC7.44□□□□□ -1.22
CIITAP33076 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC7.44□□□□□ -1.22
CIITAP33076 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7.44□□□□□ -1.22
CIITAP33076 AC099670.1-201ENST00000455141 783 ntBASIC7.44□□□□□ -1.22
CIITAP33076 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.44□□□□□ -1.22
CIITAP33076 RPL19P11-201ENST00000495944 589 ntBASIC7.44□□□□□ -1.22
CIITAP33076 TRIM36-IT1-201ENST00000503723 881 ntBASIC7.44□□□□□ -1.22
CIITAP33076 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.44□□□□□ -1.22
CIITAP33076 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC7.44□□□□□ -1.22
CIITAP33076 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.44□□□□□ -1.22
CIITAP33076 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.44□□□□□ -1.22
CIITAP33076 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC7.44□□□□□ -1.22
CIITAP33076 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC7.44□□□□□ -1.22
CIITAP33076 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.44□□□□□ -1.22
CIITAP33076 AC025283.1-201ENST00000572039 734 ntBASIC7.44□□□□□ -1.22
CIITAP33076 BUB1P1-201ENST00000603541 607 ntBASIC7.44□□□□□ -1.22
CIITAP33076 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.44□□□□□ -1.22
CIITAP33076 AL445647.2-201ENST00000615170 130 ntBASIC7.44□□□□□ -1.22
CIITAP33076 U1.41-201ENST00000617626 165 ntBASIC7.44□□□□□ -1.22
CIITAP33076 AC244100.4-201ENST00000617747 388 ntBASIC7.44□□□□□ -1.22
CIITAP33076 MIR6823-201ENST00000622118 61 ntBASIC7.44□□□□□ -1.22
CIITAP33076 CFTRP2-201ENST00000634304 199 ntBASIC7.44□□□□□ -1.22
CIITAP33076 AC007603.3-201ENST00000636915 979 ntBASIC7.44□□□□□ -1.22
CIITAP33076 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CIITAP33076 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.44□□□□□ -1.22
CIITAP33076 AC022613.3-201ENST00000560740 1346 ntBASIC7.44□□□□□ -1.22
CIITAP33076 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CIITAP33076 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CIITAP33076 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.44□□□□□ -1.22
CIITAP33076 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CIITAP33076 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC7.44□□□□□ -1.22
CIITAP33076 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CIITAP33076 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
CIITAP33076 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CIITAP33076 AC005702.3-201ENST00000585345 1447 ntBASIC7.44□□□□□ -1.22
CIITAP33076 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.43□□□□□ -1.22
CIITAP33076 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.43□□□□□ -1.22
CIITAP33076 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CIITAP33076 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.43□□□□□ -1.22
CIITAP33076 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CIITAP33076 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CIITAP33076 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.43□□□□□ -1.22
CIITAP33076 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
CIITAP33076 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC7.43□□□□□ -1.22
CIITAP33076 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC7.43□□□□□ -1.22
CIITAP33076 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.43□□□□□ -1.22
CIITAP33076 RPS18P1-201ENST00000447840 458 ntBASIC7.43□□□□□ -1.22
CIITAP33076 RBMY2BP-202ENST00000451071 1156 ntBASIC7.43□□□□□ -1.22
CIITAP33076 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.43□□□□□ -1.22
CIITAP33076 H3F3AP3-201ENST00000497682 407 ntBASIC7.43□□□□□ -1.22
CIITAP33076 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms