Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC093909.5-201ENST00000621839 1799 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC8.48□□□□□ -1.05
ERCC3P19447 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
ERCC3P19447 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
ERCC3P19447 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
ERCC3P19447 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
ERCC3P19447 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
ERCC3P19447 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
ERCC3P19447 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
ERCC3P19447 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC8.47□□□□□ -1.05
ERCC3P19447 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
ERCC3P19447 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
ERCC3P19447 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
ERCC3P19447 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC8.47□□□□□ -1.05
ERCC3P19447 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC8.47□□□□□ -1.05
ERCC3P19447 AC003985.2-201ENST00000562268 1669 ntBASIC8.47□□□□□ -1.05
ERCC3P19447 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
ERCC3P19447 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
ERCC3P19447 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
ERCC3P19447 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
ERCC3P19447 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
ERCC3P19447 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC8.47□□□□□ -1.05
ERCC3P19447 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
ERCC3P19447 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
ERCC3P19447 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
ERCC3P19447 OR51A10P-201ENST00000307165 937 ntBASIC8.47□□□□□ -1.05
ERCC3P19447 RPL26P37-201ENST00000411983 438 ntBASIC8.47□□□□□ -1.05
ERCC3P19447 UBE2V1P9-201ENST00000414760 368 ntBASIC8.47□□□□□ -1.05
ERCC3P19447 HIGD1AP15-201ENST00000416198 280 ntBASIC8.47□□□□□ -1.05
ERCC3P19447 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC8.47□□□□□ -1.05
ERCC3P19447 AC008173.1-201ENST00000418901 264 ntBASIC8.47□□□□□ -1.05
ERCC3P19447 MTCYBP7-201ENST00000419540 1134 ntBASIC8.47□□□□□ -1.05
ERCC3P19447 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC8.47□□□□□ -1.05
ERCC3P19447 DEFB130D-201ENST00000426866 237 ntBASIC8.47□□□□□ -1.05
ERCC3P19447 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC8.47□□□□□ -1.05
ERCC3P19447 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC8.47□□□□□ -1.05
ERCC3P19447 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC8.47□□□□□ -1.05
ERCC3P19447 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC8.47□□□□□ -1.05
ERCC3P19447 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC8.47□□□□□ -1.05
ERCC3P19447 TFP1-201ENST00000460564 572 ntTSL 4 BASIC8.47□□□□□ -1.05
ERCC3P19447 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC8.47□□□□□ -1.05
ERCC3P19447 TFP1-203ENST00000490470 561 ntTSL 4 BASIC8.47□□□□□ -1.05
ERCC3P19447 AC020699.1-201ENST00000505161 445 ntBASIC8.47□□□□□ -1.05
ERCC3P19447 AC139713.1-202ENST00000512366 460 ntBASIC8.47□□□□□ -1.05
ERCC3P19447 RFPL4AP3-201ENST00000515267 345 ntBASIC8.47□□□□□ -1.05
ERCC3P19447 RNA5SP287-201ENST00000516358 103 ntBASIC8.47□□□□□ -1.05
ERCC3P19447 CRADD-210ENST00000552033 622 ntTSL 3 BASIC8.47□□□□□ -1.05
ERCC3P19447 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC8.47□□□□□ -1.05
ERCC3P19447 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC8.47□□□□□ -1.05
ERCC3P19447 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC8.47□□□□□ -1.05
ERCC3P19447 RN7SL32P-201ENST00000580514 281 ntBASIC8.47□□□□□ -1.05
ERCC3P19447 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC8.47□□□□□ -1.05
ERCC3P19447 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC8.47□□□□□ -1.05
ERCC3P19447 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC8.47□□□□□ -1.05
ERCC3P19447 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC8.47□□□□□ -1.05
ERCC3P19447 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC8.47□□□□□ -1.05
ERCC3P19447 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC8.47□□□□□ -1.05
ERCC3P19447 HTR1DP1-201ENST00000616500 888 ntBASIC8.47□□□□□ -1.05
ERCC3P19447 HOTTIP_2.1-201ENST00000616633 376 ntBASIC8.47□□□□□ -1.05
ERCC3P19447 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC8.47□□□□□ -1.05
ERCC3P19447 AC211433.3-201ENST00000623770 375 ntBASIC8.47□□□□□ -1.05
ERCC3P19447 AC103703.1-201ENST00000634783 663 ntBASIC8.47□□□□□ -1.05
ERCC3P19447 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
ERCC3P19447 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
ERCC3P19447 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
ERCC3P19447 AC008432.1-201ENST00000615912 1320 ntBASIC8.47□□□□□ -1.05
ERCC3P19447 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC8.47□□□□□ -1.05
ERCC3P19447 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
ERCC3P19447 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC8.47□□□□□ -1.05
ERCC3P19447 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC8.47□□□□□ -1.05
ERCC3P19447 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
ERCC3P19447 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
ERCC3P19447 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
ERCC3P19447 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC8.47□□□□□ -1.05
ERCC3P19447 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC8.47□□□□□ -1.05
ERCC3P19447 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
ERCC3P19447 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC8.46□□□□□ -1.05
ERCC3P19447 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
ERCC3P19447 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
ERCC3P19447 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC8.46□□□□□ -1.05
ERCC3P19447 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
ERCC3P19447 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
ERCC3P19447 AC011815.2-201ENST00000618230 2021 ntBASIC8.46□□□□□ -1.05
ERCC3P19447 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
ERCC3P19447 AC241584.2-201ENST00000637142 2090 ntBASIC8.46□□□□□ -1.05
ERCC3P19447 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
ERCC3P19447 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
ERCC3P19447 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
ERCC3P19447 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
ERCC3P19447 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC8.46□□□□□ -1.06
ERCC3P19447 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC8.46□□□□□ -1.06
ERCC3P19447 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
ERCC3P19447 AP002784.2-201ENST00000397300 549 ntBASIC8.46□□□□□ -1.06
ERCC3P19447 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC8.46□□□□□ -1.06
ERCC3P19447 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC8.46□□□□□ -1.06
ERCC3P19447 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC8.46□□□□□ -1.06
ERCC3P19447 AC009500.1-201ENST00000420684 583 ntBASIC8.46□□□□□ -1.06
ERCC3P19447 AL731892.1-201ENST00000437364 1192 ntBASIC8.46□□□□□ -1.06
ERCC3P19447 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
ERCC3P19447 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms