Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.55□□□□□ -1.36
CD53P19397 AC005021.1-201ENST00000608730 355 ntBASIC6.55□□□□□ -1.36
CD53P19397 AC009283.1-201ENST00000615852 645 ntBASIC6.55□□□□□ -1.36
CD53P19397 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.55□□□□□ -1.36
CD53P19397 AC183089.2-201ENST00000637931 916 ntBASIC6.55□□□□□ -1.36
CD53P19397 WNK1-220ENST00000574564 1401 ntBASIC6.55□□□□□ -1.36
CD53P19397 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD53P19397 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD53P19397 MT-RNR2-201ENST00000387347 1559 ntBASIC6.55□□□□□ -1.36
CD53P19397 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CD53P19397 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.55□□□□□ -1.36
CD53P19397 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD53P19397 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
CD53P19397 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.55□□□□□ -1.36
CD53P19397 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD53P19397 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD53P19397 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD53P19397 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CD53P19397 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD53P19397 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD53P19397 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD53P19397 ATP5A1P10-201ENST00000622403 1603 ntBASIC6.54□□□□□ -1.36
CD53P19397 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
CD53P19397 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD53P19397 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.54□□□□□ -1.36
CD53P19397 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD53P19397 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD53P19397 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CD53P19397 OR11H13P-201ENST00000359695 979 ntBASIC6.54□□□□□ -1.36
CD53P19397 RNA5SP514-201ENST00000363717 111 ntBASIC6.54□□□□□ -1.36
CD53P19397 RNA5SP396-201ENST00000364834 120 ntBASIC6.54□□□□□ -1.36
CD53P19397 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
CD53P19397 PTMAP8-201ENST00000397729 342 ntBASIC6.54□□□□□ -1.36
CD53P19397 NUS1P4-201ENST00000401550 585 ntBASIC6.54□□□□□ -1.36
CD53P19397 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.54□□□□□ -1.36
CD53P19397 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.54□□□□□ -1.36
CD53P19397 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.54□□□□□ -1.36
CD53P19397 GAPDHP69-201ENST00000425504 1008 ntBASIC6.54□□□□□ -1.36
CD53P19397 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD53P19397 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6.54□□□□□ -1.36
CD53P19397 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.54□□□□□ -1.36
CD53P19397 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.54□□□□□ -1.36
CD53P19397 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.54□□□□□ -1.36
CD53P19397 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD53P19397 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD53P19397 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.54□□□□□ -1.36
CD53P19397 AL354872.1-201ENST00000456361 967 ntBASIC6.54□□□□□ -1.36
CD53P19397 AP002345.1-201ENST00000456493 928 ntBASIC6.54□□□□□ -1.36
CD53P19397 WBP1LP1-201ENST00000460451 896 ntBASIC6.54□□□□□ -1.36
CD53P19397 RN7SL834P-201ENST00000461450 286 ntBASIC6.54□□□□□ -1.36
CD53P19397 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.54□□□□□ -1.36
CD53P19397 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.54□□□□□ -1.36
CD53P19397 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.54□□□□□ -1.36
CD53P19397 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.54□□□□□ -1.36
CD53P19397 IGHV3-63-201ENST00000518422 341 ntBASIC6.54□□□□□ -1.36
CD53P19397 MTND2P7-201ENST00000521337 640 ntBASIC6.54□□□□□ -1.36
CD53P19397 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.54□□□□□ -1.36
CD53P19397 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD53P19397 OR4A6P-201ENST00000534364 970 ntBASIC6.54□□□□□ -1.36
CD53P19397 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.54□□□□□ -1.36
CD53P19397 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC6.54□□□□□ -1.36
CD53P19397 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.54□□□□□ -1.36
CD53P19397 AC018552.1-201ENST00000562099 811 ntBASIC6.54□□□□□ -1.36
CD53P19397 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6.54□□□□□ -1.36
CD53P19397 FCGR1CP-201ENST00000579737 1127 ntBASIC6.54□□□□□ -1.36
CD53P19397 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.54□□□□□ -1.36
CD53P19397 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.54□□□□□ -1.36
CD53P19397 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.54□□□□□ -1.36
CD53P19397 AC139493.1-201ENST00000604368 397 ntBASIC6.54□□□□□ -1.36
CD53P19397 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD53P19397 AC080112.3-201ENST00000612552 880 ntBASIC6.54□□□□□ -1.36
CD53P19397 AC006335.3-201ENST00000613408 292 ntBASIC6.54□□□□□ -1.36
CD53P19397 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.54□□□□□ -1.36
CD53P19397 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CD53P19397 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.54□□□□□ -1.36
CD53P19397 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC6.54□□□□□ -1.36
CD53P19397 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC6.54□□□□□ -1.36
CD53P19397 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD53P19397 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD53P19397 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.54□□□□□ -1.36
CD53P19397 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD53P19397 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD53P19397 AC034111.1-201ENST00000562143 3770 ntBASIC6.54□□□□□ -1.36
CD53P19397 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
CD53P19397 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CD53P19397 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD53P19397 LPAL2-203ENST00000454031 2498 ntBASIC6.54□□□□□ -1.36
CD53P19397 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD53P19397 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.54□□□□□ -1.36
CD53P19397 NXF4-202ENST00000416098 1465 ntBASIC6.53□□□□□ -1.36
CD53P19397 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CD53P19397 AC079949.2-201ENST00000617117 2933 ntBASIC6.53□□□□□ -1.36
CD53P19397 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CD53P19397 AP003471.1-202ENST00000319051 1988 ntBASIC6.53□□□□□ -1.36
CD53P19397 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.53□□□□□ -1.36
CD53P19397 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.53□□□□□ -1.36
CD53P19397 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.53□□□□□ -1.36
CD53P19397 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CD53P19397 KYNUP1-201ENST00000466683 1406 ntBASIC6.53□□□□□ -1.36
CD53P19397 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms