Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC7.22□□□□□ -1.25
TPM1P09493 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.22□□□□□ -1.25
TPM1P09493 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.22□□□□□ -1.25
TPM1P09493 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.22□□□□□ -1.25
TPM1P09493 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.22□□□□□ -1.25
TPM1P09493 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
TPM1P09493 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC7.22□□□□□ -1.25
TPM1P09493 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TPM1P09493 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.22□□□□□ -1.25
TPM1P09493 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TPM1P09493 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.22□□□□□ -1.25
TPM1P09493 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TPM1P09493 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
TPM1P09493 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TPM1P09493 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
TPM1P09493 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
TPM1P09493 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7.21□□□□□ -1.25
TPM1P09493 ZNF806-201ENST00000438300 1774 ntBASIC7.21□□□□□ -1.25
TPM1P09493 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.21□□□□□ -1.26
TPM1P09493 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
TPM1P09493 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TPM1P09493 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TPM1P09493 RNU1-59P-201ENST00000364829 162 ntBASIC7.21□□□□□ -1.26
TPM1P09493 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.21□□□□□ -1.26
TPM1P09493 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC7.21□□□□□ -1.26
TPM1P09493 NIP7P1-201ENST00000433227 512 ntBASIC7.21□□□□□ -1.26
TPM1P09493 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.21□□□□□ -1.26
TPM1P09493 RPL23AP28-201ENST00000448062 470 ntBASIC7.21□□□□□ -1.26
TPM1P09493 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.21□□□□□ -1.26
TPM1P09493 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC7.21□□□□□ -1.26
TPM1P09493 CCNJP2-201ENST00000457810 1163 ntBASIC7.21□□□□□ -1.26
TPM1P09493 RPL7AP23-201ENST00000482625 776 ntBASIC7.21□□□□□ -1.26
TPM1P09493 NPM1P27-201ENST00000502784 830 ntBASIC7.21□□□□□ -1.26
TPM1P09493 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC7.21□□□□□ -1.26
TPM1P09493 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC7.21□□□□□ -1.26
TPM1P09493 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC7.21□□□□□ -1.26
TPM1P09493 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TPM1P09493 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.21□□□□□ -1.26
TPM1P09493 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.21□□□□□ -1.26
TPM1P09493 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.21□□□□□ -1.26
TPM1P09493 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC7.21□□□□□ -1.26
TPM1P09493 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC7.21□□□□□ -1.26
TPM1P09493 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC7.21□□□□□ -1.26
TPM1P09493 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.21□□□□□ -1.26
TPM1P09493 AP002383.5-201ENST00000542623 1161 ntBASIC7.21□□□□□ -1.26
TPM1P09493 AC091304.4-201ENST00000565703 620 ntBASIC7.21□□□□□ -1.26
TPM1P09493 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.21□□□□□ -1.26
TPM1P09493 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.21□□□□□ -1.26
TPM1P09493 AL157899.1-201ENST00000604110 936 ntBASIC7.21□□□□□ -1.26
TPM1P09493 AL590032.1-201ENST00000604920 252 ntBASIC7.21□□□□□ -1.26
TPM1P09493 U1.25-201ENST00000614085 162 ntBASIC7.21□□□□□ -1.26
TPM1P09493 AL031658.2-201ENST00000616850 651 ntBASIC7.21□□□□□ -1.26
TPM1P09493 U1.34-201ENST00000618578 162 ntBASIC7.21□□□□□ -1.26
TPM1P09493 U1.31-201ENST00000620022 160 ntBASIC7.21□□□□□ -1.26
TPM1P09493 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.21□□□□□ -1.26
TPM1P09493 FKBP1AP4-201ENST00000631775 336 ntBASIC7.21□□□□□ -1.26
TPM1P09493 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TPM1P09493 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
TPM1P09493 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.21□□□□□ -1.26
TPM1P09493 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
TPM1P09493 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
TPM1P09493 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
TPM1P09493 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC7.21□□□□□ -1.26
TPM1P09493 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.2□□□□□ -1.26
TPM1P09493 AC105235.1-201ENST00000623208 1816 ntBASIC7.2□□□□□ -1.26
TPM1P09493 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TPM1P09493 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
TPM1P09493 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC7.2□□□□□ -1.26
TPM1P09493 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC7.2□□□□□ -1.26
TPM1P09493 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
TPM1P09493 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC7.2□□□□□ -1.26
TPM1P09493 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7.2□□□□□ -1.26
TPM1P09493 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.2□□□□□ -1.26
TPM1P09493 PRKAR1AP1-201ENST00000441422 1162 ntBASIC7.2□□□□□ -1.26
TPM1P09493 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.2□□□□□ -1.26
TPM1P09493 RN7SL492P-201ENST00000460700 295 ntBASIC7.2□□□□□ -1.26
TPM1P09493 AL135933.1-201ENST00000498657 802 ntBASIC7.2□□□□□ -1.26
TPM1P09493 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC7.2□□□□□ -1.26
TPM1P09493 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC7.2□□□□□ -1.26
TPM1P09493 AC021820.1-201ENST00000525564 808 ntBASIC7.2□□□□□ -1.26
TPM1P09493 SSU72P6-201ENST00000532644 488 ntBASIC7.2□□□□□ -1.26
TPM1P09493 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC7.2□□□□□ -1.26
TPM1P09493 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.2□□□□□ -1.26
TPM1P09493 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC7.2□□□□□ -1.26
TPM1P09493 AL049840.5-201ENST00000602827 552 ntBASIC7.2□□□□□ -1.26
TPM1P09493 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC7.2□□□□□ -1.26
TPM1P09493 FRG2MP-201ENST00000613317 856 ntBASIC7.2□□□□□ -1.26
TPM1P09493 AC005277.2-201ENST00000617898 390 ntBASIC7.2□□□□□ -1.26
TPM1P09493 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TPM1P09493 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TPM1P09493 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TPM1P09493 NCOA4P2-201ENST00000340589 1813 ntBASIC7.2□□□□□ -1.26
TPM1P09493 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.2□□□□□ -1.26
TPM1P09493 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.2□□□□□ -1.26
TPM1P09493 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TPM1P09493 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TPM1P09493 AP002512.4-202ENST00000641599 4530 ntBASIC7.19□□□□□ -1.26
TPM1P09493 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.19□□□□□ -1.26
TPM1P09493 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TPM1P09493 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms