Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AL391597.1-201ENST00000618707 694 ntBASIC6.99□□□□□ -1.29
DKK3Q9UBP4 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.99□□□□□ -1.29
DKK3Q9UBP4 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.99□□□□□ -1.29
DKK3Q9UBP4 AC009452.1-201ENST00000640823 606 ntBASIC6.99□□□□□ -1.29
DKK3Q9UBP4 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.99□□□□□ -1.29
DKK3Q9UBP4 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
DKK3Q9UBP4 AC009220.2-201ENST00000489759 1751 ntBASIC6.99□□□□□ -1.29
DKK3Q9UBP4 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
DKK3Q9UBP4 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.99□□□□□ -1.29
DKK3Q9UBP4 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
DKK3Q9UBP4 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.99□□□□□ -1.29
DKK3Q9UBP4 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
DKK3Q9UBP4 AC024341.1-201ENST00000526444 1552 ntBASIC6.99□□□□□ -1.29
DKK3Q9UBP4 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
DKK3Q9UBP4 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
DKK3Q9UBP4 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 PSMC1P2-201ENST00000423961 1204 ntBASIC6.98□□□□□ -1.29
DKK3Q9UBP4 AC244033.1-201ENST00000426826 870 ntBASIC6.98□□□□□ -1.29
DKK3Q9UBP4 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 BX119917.1-201ENST00000432517 502 ntBASIC6.98□□□□□ -1.29
DKK3Q9UBP4 CLNS1AP1-201ENST00000435954 682 ntBASIC6.98□□□□□ -1.29
DKK3Q9UBP4 AL590399.4-201ENST00000436561 601 ntBASIC6.98□□□□□ -1.29
DKK3Q9UBP4 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 GOT2P2-201ENST00000450663 1251 ntBASIC6.98□□□□□ -1.29
DKK3Q9UBP4 RPL7AP71-201ENST00000451120 739 ntBASIC6.98□□□□□ -1.29
DKK3Q9UBP4 RN7SL372P-201ENST00000461982 298 ntBASIC6.98□□□□□ -1.29
DKK3Q9UBP4 AC096743.1-201ENST00000485172 319 ntBASIC6.98□□□□□ -1.29
DKK3Q9UBP4 PPP1R11P1-201ENST00000486095 376 ntBASIC6.98□□□□□ -1.29
DKK3Q9UBP4 RPS4XP23-201ENST00000487801 237 ntBASIC6.98□□□□□ -1.29
DKK3Q9UBP4 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 RNU6-964P-201ENST00000516524 69 ntBASIC6.98□□□□□ -1.29
DKK3Q9UBP4 EEF1B2P2-201ENST00000519625 676 ntBASIC6.98□□□□□ -1.29
DKK3Q9UBP4 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 NXPE2P1-201ENST00000543705 726 ntBASIC6.98□□□□□ -1.29
DKK3Q9UBP4 AC125612.1-201ENST00000547580 377 ntBASIC6.98□□□□□ -1.29
DKK3Q9UBP4 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 AL731537.2-201ENST00000561565 951 ntBASIC6.98□□□□□ -1.29
DKK3Q9UBP4 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.98□□□□□ -1.29
DKK3Q9UBP4 AC020765.1-201ENST00000604296 328 ntBASIC6.98□□□□□ -1.29
DKK3Q9UBP4 AC111186.1-201ENST00000604684 130 ntBASIC6.98□□□□□ -1.29
DKK3Q9UBP4 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 MAPK10-287ENST00000641217 3037 ntBASIC6.98□□□□□ -1.29
DKK3Q9UBP4 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
DKK3Q9UBP4 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.97□□□□□ -1.29
DKK3Q9UBP4 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
DKK3Q9UBP4 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.97□□□□□ -1.29
DKK3Q9UBP4 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
DKK3Q9UBP4 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
DKK3Q9UBP4 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
DKK3Q9UBP4 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
DKK3Q9UBP4 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.97□□□□□ -1.29
DKK3Q9UBP4 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
DKK3Q9UBP4 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
DKK3Q9UBP4 AC020978.6-201ENST00000571197 3177 ntBASIC6.97□□□□□ -1.29
DKK3Q9UBP4 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
DKK3Q9UBP4 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
DKK3Q9UBP4 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
DKK3Q9UBP4 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
DKK3Q9UBP4 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC6.97□□□□□ -1.29
DKK3Q9UBP4 RN7SKP189-201ENST00000365042 330 ntBASIC6.97□□□□□ -1.29
DKK3Q9UBP4 PPIAP26-201ENST00000377951 522 ntBASIC6.97□□□□□ -1.29
DKK3Q9UBP4 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
DKK3Q9UBP4 RPL18AP14-201ENST00000417685 526 ntBASIC6.97□□□□□ -1.29
DKK3Q9UBP4 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.97□□□□□ -1.29
DKK3Q9UBP4 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
DKK3Q9UBP4 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms