Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 IL6-206ENST00000407492 926 ntTSL 3 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 RN7SKP94-201ENST00000411044 284 ntBASIC8.09□□□□□ -1.11
USB1Q9BQ65 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 AC008781.1-201ENST00000422040 621 ntTSL 3 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 AL035420.1-201ENST00000430679 458 ntTSL 5 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 FTO-202ENST00000431610 707 ntTSL 3 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 AL133410.1-202ENST00000431981 472 ntTSL 3 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 IQCF4-204ENST00000433169 414 ntTSL 3 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
USB1Q9BQ65 LINC02543-201ENST00000451285 845 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
USB1Q9BQ65 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 MTCO3P20-201ENST00000454926 688 ntBASIC8.09□□□□□ -1.11
USB1Q9BQ65 AC021660.1-201ENST00000465006 554 ntBASIC8.09□□□□□ -1.11
USB1Q9BQ65 AL928654.1-201ENST00000476081 354 ntBASIC8.09□□□□□ -1.11
USB1Q9BQ65 AC073522.1-201ENST00000483312 377 ntBASIC8.09□□□□□ -1.11
USB1Q9BQ65 RPL7P38-201ENST00000488396 739 ntBASIC8.09□□□□□ -1.11
USB1Q9BQ65 AC012170.1-201ENST00000495139 359 ntBASIC8.09□□□□□ -1.11
USB1Q9BQ65 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 AC100849.2-201ENST00000518324 519 ntTSL 2 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 AC084128.1-201ENST00000523112 501 ntTSL 3 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 AC103681.1-201ENST00000531663 423 ntTSL 3 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 AP001372.1-202ENST00000533008 344 ntTSL 3 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 AP001767.3-201ENST00000533329 436 ntTSL 5 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 AC018410.1-202ENST00000545474 492 ntTSL 2 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 OR11J5P-201ENST00000556889 934 ntBASIC8.09□□□□□ -1.11
USB1Q9BQ65 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 AC008870.2-201ENST00000568262 1024 ntBASIC8.09□□□□□ -1.11
USB1Q9BQ65 MIR5697-201ENST00000578045 78 ntBASIC8.09□□□□□ -1.11
USB1Q9BQ65 MIR4440-201ENST00000583986 98 ntBASIC8.09□□□□□ -1.11
USB1Q9BQ65 RIT2-202ENST00000589109 1156 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
USB1Q9BQ65 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 AC007687.1-201ENST00000602704 304 ntBASIC8.09□□□□□ -1.11
USB1Q9BQ65 AC055822.1-201ENST00000606067 445 ntBASIC8.09□□□□□ -1.11
USB1Q9BQ65 RN7SKP290-201ENST00000606842 195 ntBASIC8.09□□□□□ -1.11
USB1Q9BQ65 EDRF1-AS1-207ENST00000610534 706 ntTSL 5 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 AL031658.2-201ENST00000616850 651 ntBASIC8.09□□□□□ -1.11
USB1Q9BQ65 BX510359.8-201ENST00000617713 296 ntBASIC8.09□□□□□ -1.11
USB1Q9BQ65 AL109804.1-201ENST00000620777 562 ntTSL 5 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 AP000787.3-201ENST00000634407 307 ntBASIC8.09□□□□□ -1.11
USB1Q9BQ65 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
USB1Q9BQ65 TRIM55-201ENST00000276573 1960 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
USB1Q9BQ65 TMEM231-201ENST00000258173 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
USB1Q9BQ65 BMS1P1-202ENST00000580094 4294 ntTSL 5 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 ZNF304-201ENST00000282286 4202 ntAPPRIS P3 TSL 2 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
USB1Q9BQ65 ACSM6-202ENST00000341686 1712 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 SP2-AS1-201ENST00000411573 1738 ntTSL 2 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 PLSCR4-210ENST00000493382 1375 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.12
USB1Q9BQ65 ZRANB2-202ENST00000370920 3078 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.12
USB1Q9BQ65 DCAF4-212ENST00000553457 2896 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
USB1Q9BQ65 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC8.08□□□□□ -1.12
USB1Q9BQ65 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
USB1Q9BQ65 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
USB1Q9BQ65 RNASE9-207ENST00000555230 2668 ntAPPRIS P3 TSL 2 BASIC8.08□□□□□ -1.12
USB1Q9BQ65 LRRC4-201ENST00000249363 3828 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
USB1Q9BQ65 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
USB1Q9BQ65 LNP1-203ENST00000489752 1813 ntTSL 5 BASIC8.08□□□□□ -1.12
USB1Q9BQ65 CICP22-201ENST00000432801 1319 ntBASIC8.08□□□□□ -1.12
USB1Q9BQ65 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
USB1Q9BQ65 RBMS2-204ENST00000550726 1452 ntTSL 2 BASIC8.08□□□□□ -1.12
USB1Q9BQ65 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC8.08□□□□□ -1.12
USB1Q9BQ65 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
USB1Q9BQ65 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC8.08□□□□□ -1.12
USB1Q9BQ65 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC8.08□□□□□ -1.12
USB1Q9BQ65 HMGCLL1-206ENST00000428842 2437 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
USB1Q9BQ65 GNPDA2-201ENST00000295448 1930 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
USB1Q9BQ65 CREM-212ENST00000374728 1933 ntTSL 5 BASIC8.08□□□□□ -1.12
USB1Q9BQ65 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
USB1Q9BQ65 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
USB1Q9BQ65 OR10H3-201ENST00000305892 951 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
USB1Q9BQ65 RAET1E-201ENST00000357183 958 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
USB1Q9BQ65 ARR3-202ENST00000374495 1298 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
USB1Q9BQ65 RNU6-723P-201ENST00000383973 107 ntBASIC8.08□□□□□ -1.12
USB1Q9BQ65 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
USB1Q9BQ65 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
USB1Q9BQ65 AL161909.1-201ENST00000397390 712 ntBASIC8.08□□□□□ -1.12
USB1Q9BQ65 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
USB1Q9BQ65 AC013404.1-201ENST00000413068 249 ntBASIC8.08□□□□□ -1.12
USB1Q9BQ65 JKAMPP1-201ENST00000413804 919 ntBASIC8.08□□□□□ -1.12
USB1Q9BQ65 HMGB1P11-201ENST00000413899 637 ntBASIC8.08□□□□□ -1.12
USB1Q9BQ65 SNRPEP10-201ENST00000420249 274 ntBASIC8.08□□□□□ -1.12
USB1Q9BQ65 AL355526.1-201ENST00000420347 215 ntTSL 5 BASIC8.08□□□□□ -1.12
USB1Q9BQ65 BLOC1S2P1-201ENST00000428431 301 ntBASIC8.08□□□□□ -1.12
USB1Q9BQ65 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC8.08□□□□□ -1.12
USB1Q9BQ65 PSMD10P2-201ENST00000432890 672 ntBASIC8.08□□□□□ -1.12
USB1Q9BQ65 IPO7P1-201ENST00000442031 636 ntBASIC8.08□□□□□ -1.12
USB1Q9BQ65 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
USB1Q9BQ65 OR51P1P-201ENST00000447547 942 ntBASIC8.08□□□□□ -1.12
USB1Q9BQ65 RGS5-217ENST00000451759 835 ntTSL 3 BASIC8.08□□□□□ -1.12
USB1Q9BQ65 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC8.08□□□□□ -1.12
USB1Q9BQ65 AL139156.3-201ENST00000454802 394 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms