Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 FRG2B-202ENST00000443774 2094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 ZNF207-202ENST00000342555 1905 ntTSL 5 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 SYNPR-212ENST00000479198 2436 ntTSL 5 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 DRAIC-201ENST00000498938 1345 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 IMPG1-204ENST00000611179 3324 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 RN7SKP173-201ENST00000362821 315 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 AC009967.1-201ENST00000379462 793 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 NEK10-203ENST00000383770 1257 ntTSL 5 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 RNU6-452P-201ENST00000384406 107 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 CNN2P7-201ENST00000400583 932 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 AGR3-202ENST00000402239 563 ntTSL 2 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 NCSTNP1-201ENST00000406229 144 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 RN7SKP263-201ENST00000411194 309 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 Z97987.1-202ENST00000411708 391 ntTSL 3 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 SEM1-203ENST00000413065 661 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 CCDC58P2-201ENST00000417131 366 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 TMEM211-202ENST00000423535 695 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 AC011998.2-201ENST00000430884 473 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 RPL29P7-201ENST00000440227 457 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 IFITM4P-207ENST00000441380 420 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 MDC1-AS1-201ENST00000442150 738 ntTSL 3 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 OR13K1P-201ENST00000444577 975 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 AL109933.1-201ENST00000448126 292 ntTSL 5 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 PAX8-AS1-208ENST00000456685 1207 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 TMED11P-201ENST00000479478 690 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 HNRNPA1P20-201ENST00000484852 955 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 OR9A3P-202ENST00000485185 878 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 RPS7P6-201ENST00000485777 579 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 AC122714.1-201ENST00000502510 459 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 HMGB1P44-201ENST00000508597 572 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 AP000916.2-201ENST00000528904 286 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 AC005842.1-201ENST00000537149 678 ntTSL 3 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 AC011767.1-203ENST00000559762 529 ntTSL 5 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 AC009139.1-201ENST00000561672 652 ntTSL 2 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 VN1R65P-201ENST00000566443 808 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 TTC39A-AS1-202ENST00000568425 554 ntTSL 3 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 RN7SL670P-201ENST00000577235 294 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 FAM106CP-201ENST00000582212 507 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 AC026458.2-201ENST00000589323 531 ntTSL 5 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 TRMT112P7-201ENST00000603133 367 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 AL161729.2-201ENST00000605700 456 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 AC009237.16-201ENST00000612987 506 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 AL357080.1-201ENST00000617394 239 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 Metazoa_SRP.126-201ENST00000618354 266 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 RN7SL575P-201ENST00000620774 299 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 AC092794.2-201ENST00000620933 563 ntBASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 PRICKLE2-AS3-201ENST00000473434 2496 ntTSL 2 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 OR10J6P-201ENST00000289731 930 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 DEFB104A-201ENST00000314265 281 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 DEFB104B-201ENST00000316169 281 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 RNU6-1339P-201ENST00000363574 91 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 Y_RNA.303-201ENST00000364998 94 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 RNU6-761P-201ENST00000384148 107 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 MT-TP-201ENST00000387461 68 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AL133406.1-201ENST00000404904 747 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms